Ketogulonicigenium vulgare WSH-001: KVU_1710
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Entry
KVU_1710 CDS
T01909
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03030
DNA replication
kvl03430
Mismatch repair
kvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KVU_1710 (dnaE)
03430 Mismatch repair
KVU_1710 (dnaE)
03440 Homologous recombination
KVU_1710 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kvl03032
]
KVU_1710 (dnaE)
03400 DNA repair and recombination proteins [BR:
kvl03400
]
KVU_1710 (dnaE)
Enzymes [BR:
kvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KVU_1710 (dnaE)
DNA replication proteins [BR:
kvl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KVU_1710 (dnaE)
DNA repair and recombination proteins [BR:
kvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KVU_1710 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
DUF655
Motif
Other DBs
NCBI-ProteinID:
AEM41549
UniProt:
F9YAL8
LinkDB
All DBs
Position
complement(1816236..1819802)
Genome browser
AA seq
1188 aa
AA seq
DB search
MKVGQALPVPQAAGYGWSMTAKGAAMADPKFIHLRVHTEYSLLEGAIHAGDLPKLAKAAG
MPAVAVTDTNNLFCALEFSEKASKSGIQPIIGCQVDLTYMKVEAGKRAEDPAPIVLLAQS
EVGYANLMALNSCAYLDKGGALPQVTTADLAAHAEGLICLTGGPDGPLGRMIRAGQDNAA
RLLLERLAAIYPNRLYVELQRHPIEGGLPDAEAQTERPFIEWAYALNLPLVATNDAYFKD
EGFYEAHDALICIAEGAYVDQQEPRRKLTPQHYFKSQAEMATLFADLPEALENTVEIAKR
CAFKAYKRDPILPRFADDEVEELRRQSKAGLQARLDVIPHAAELHVYWDRLEFEMNIIEK
MGFPGYFLIVADFIKWAKDEGIPVGPGRGSGAGSLVAYALTITDLDPIRYSLLFERFLNP
ERVSMPDFDIDFCMDRREEVIQYVQGKYGRDRVAQIITFGALLSKAAVRDVGRVLQMPYG
QVDRLSKMIPVEGVKPVSIAQALKDEPRLREEADREPVVARLLDYAQQVEGLLRNASTHA
AGVVIGDRPLDHLVPLYQDPRSDMPATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVSLI
RKSGRHLHEAADGTVLYTPPKGAEDDIGAIPLDDAKSYQLYSDAKTVAVFQVESTGMMDA
LKRMKPTCIEDIVALVALYRPGPMENIPTYCEVKNGQREITSIHPTIDFILAETQGIIVY
QEQVMQIAQVMAGYSLGGADLLRRAMGKKIAEEMAKERPKFTTGAKETHNIDEKKAGEVF
DLLEKFANYGFNKSHAAAYAVVSYQTAWLKANHAVEFMAGVMNCDIHLTDKLAVYFQEVR
RGLKLGTVPPCVNRSLATFDVVDGKLVYALGALKNVGVDAMRLVVEARAGKPFVTLFDFA
RRVDLKRVGKRPLEMMARAGAFDVLDSNRRRVLESLDALVAYSVAVHEQRSSNQVSLFGE
GGDDLPEPRLPNVPDWLAAERLGEEFKAIGFYLSGHPLDDHMPGLRRKGVLTLSEVEGKA
QNGAFLARMAGVVSGRQERKSARGNRFAFAQLSDPSGQYEVTIFSDVLEAARPLLEAGTQ
VILQAEATLEADQLKLLARSFSAVGEMDTGVEGYRIYIDREEALAQVSSVLENAIAAKVR
APRGHIAFEIIVPDVGEVKIEAPRTYPLNPQIRAALRAVNGVQEVIEV
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtcggccaagccttgcccgttcctcaggcggcgggttatggctggtcaatgacg
gcgaagggggctgcaatggctgatccgaagtttatccatctgcgggtgcataccgaatat
tccctgctggaaggcgcgatccatgcgggcgatctgccaaagctggcgaaagccgccgga
atgcctgcggtcgccgtcactgataccaataacctgttctgcgcgctggaattttctgaa
aaagcctcgaaatccggcattcagccgatcatcggctgtcaggtcgatctgacctatatg
aaggtcgaggcgggcaagcgcgccgaggacccggccccgatcgtgctgctggcgcaatcc
gaggttggttatgccaatctgatggcgctgaattcctgtgcctatctggacaagggcggt
gcgctgccgcaggtgacgaccgccgatcttgcggctcatgccgaggggctgatctgcctg
accggcggccccgatggcccgctgggccggatgatccgcgctggacaagacaatgccgcc
cgcctgctgctggaacgcctcgccgcgatttatcccaaccgcctttatgtcgagctgcag
cgccacccgatcgagggcggcttgccggatgcggaggcgcagaccgagcggccctttatt
gaatgggcctatgcgctgaacctgccactggttgcgaccaacgatgcctatttcaaggat
gaaggcttctatgaggcgcatgacgcactgatctgcatcgccgagggcgcctatgtcgac
cagcaagaacctcgccgcaagctgacgccgcagcattatttcaaatcgcaggccgagatg
gcgaccctgttcgccgatctgcccgaggcgctggaaaacaccgtcgagatcgcgaaacgc
tgcgcgttcaaagcctataagcgcgaccctattctgccccgtttcgcggatgacgaggtc
gaggagctgcgccgtcagtcgaaagccggtctgcaagcgcgccttgatgtgatcccccat
gcggcggaattgcatgtctattgggatcgcctggaattcgagatgaatatcatcgagaag
atgggctttcccggttacttcctgatcgtggcggatttcatcaaatgggccaaggacgag
ggtattccggtggggccggggcgcggttcgggtgcgggcagtttggtcgcctatgcgctg
acgatcaccgacctagacccaatccgctatagcctgctgttcgagcggttcctgaacccc
gaacgcgtctcgatgccggactttgatatcgacttttgcatggatcgccgcgaggaggtg
atccaatatgtgcagggtaaatatggtcgcgaccgcgtggcgcagatcattacattcggt
gcgctgctgtcgaaagccgctgtgcgcgacgtgggccgtgtgctgcagatgccctatgga
caggttgaccgcctgtccaagatgatccccgtcgagggggtcaagcccgtctcgatcgcg
caggccctgaaagacgagccgcgtctgcgcgaggaggcggatcgcgagcctgtggttgcg
cggctcttggactacgcgcagcaggtcgaggggcttttgcgcaatgcctcgacccacgcg
gcgggggtggtgatcggcgaccggccgctggatcatctggtgccgctttaccaagatccg
cgatcggacatgcccgcgacccagttcaatatgaaatgggtcgaacaggcggggctggtg
aaattcgactttctgggcctgaaaaccctgaccgtcattcaaaacgcggtcagcctgatc
cgcaaatccggccgccatttgcacgaggcggcagatggcacggtgctttataccccgccc
aagggggccgaggatgatatcggcgcgatcccgttggatgatgcgaaatcctatcagctt
tattccgacgccaagaccgtcgccgtctttcaggttgaatcgaccggcatgatggatgcg
ctcaagcgcatgaagccgacctgtatcgaggatatcgtcgcactggtggccctctatcgt
cccggcccgatggaaaacatcccgacctattgcgaggtgaagaacggccagcgcgagatc
acctcgatccatccgaccatcgactttattctggccgaaacgcagggcattatcgtttac
caagaacaggtgatgcagatcgcgcaggtcatggcgggctatagcctagggggcgccgac
ttgctccgccgcgccatgggtaaaaagatcgccgaggaaatggcgaaagagcggcccaag
tttaccacgggcgcgaaagaaacccataatatcgacgagaaaaaggctggcgaagtcttt
gacttgctcgagaaattcgcgaattatggtttcaacaaatcgcacgcggcagcctatgcg
gtggtcagctatcagaccgcctggctaaaggcgaaccacgcggtcgagttcatggccggc
gtcatgaactgcgatatccatctgacggataagctggcagtctatttccaagaggtgcgc
cgcgggctgaagctgggcacggtgccgccctgcgtgaaccgctcgctggcgacgttcgac
gtggtggatggcaagttggtctatgcgctgggcgcgctgaaaaacgtcggcgttgatgcg
atgcggctggtggtcgaggcacgcgcgggcaagccctttgtgacgctgttcgattttgcc
cgccgcgttgatctgaaacgcgtcggcaagcgcccgctggaaatgatggcgcgcgccggt
gcctttgacgtgctggatagcaaccgccgccgcgtgctggaatcgctcgatgcgctggtg
gcttattcggtcgcggtgcacgaacagcgcagctcgaaccaggtatcgctgtttggtgaa
ggcggcgatgacctgcccgagccgcgcctgcccaacgttcccgactggctggcggccgag
cgtttgggcgaggaattcaaggcgatcggcttttacctgtccggtcacccgctggatgat
cacatgccgggcctgcgccgcaaaggtgtcctgaccctgtcggaagtcgagggcaaggcg
caaaacggtgcgtttctggcgcggatggcgggggttgtctcggggcggcaagagcgtaaa
tcggcacgtggcaaccgctttgcctttgcgcaactgtctgatccgtcgggacaatacgag
gtcacgattttctcggacgtgctagaggcggcccgtcccctgcttgaggcaggcacgcag
gtcatcttgcaggccgaggcgacgctggaggcggatcagctgaaactgctggcgcgatcc
tttagtgccgtgggcgagatggacactggcgtcgaggggtatcgcatctatatcgaccgc
gaggaggcgctggcgcaggtgtcatcggtgctggaaaacgccattgcggccaaggtgcgc
gccccgcgtggccatatcgcattcgagatcatcgtgccggatgtgggcgaggtaaagatc
gaggccccccggacctatccgctgaacccgcaaatccgcgcggcattgcgcgcggtgaac
ggggtgcaggaagtcatcgaggtctaa
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