Ketogulonicigenium vulgare WSH-001: KVU_1986
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Entry
KVU_1986 CDS
T01909
Symbol
recJ
Name
(GenBank) Single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03410
Base excision repair
kvl03430
Mismatch repair
kvl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KVU_1986 (recJ)
03430 Mismatch repair
KVU_1986 (recJ)
03440 Homologous recombination
KVU_1986 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvl03400
]
KVU_1986 (recJ)
DNA repair and recombination proteins [BR:
kvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
KVU_1986 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
KVU_1986 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
KVU_1986 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AEM41825
UniProt:
F9Y4U1
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All DBs
Position
2101733..2103286
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AA seq
517 aa
AA seq
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MPDPRSLRDMEKAAARLVLAVQTRQRIAIFGDYDVDGGASSALLIDWLRNFGLQATLYIP
DRIDEGYGPNVPAMADLAARHDLIICVDCGTLSHEALGAATAADVIVLDHHLGGETLPPA
LAVVNPNRQDESGDLTYLCAAGVVFLALVEANRQLRAGGLQGPDLTSLLDLVALATVADV
APLVGLNRALVRQGLAVMGRRARPGLVALADVARIDSAPSSYHLGYILGPRVNAGGRIGR
ADLGARLLATTDPHEAAAMAAQLDALNTERRAIESAVRDAAIAQAEARGLEAPLVWAASE
GWHPGVVGIVAARIKEATNRPSVVIGFDGGIGKGSGRSVSGVDLGAAIQRVAAEGLLLKG
GGHKMAAGLTVTRENLEPAMARLSELLARQGAGAGGPSDLRIDALLMPGAATVAMIEQLE
QAGPFGASAPAPRFALPDVVVQYVKPVGSDHLKVTLGDGLGARLDAIAFNAAQSPLGHLL
THSGSQRVHVVGRLEVNHWQGRASAQLRIEDAAKASS
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgcccgacccgcgcagcctgcgggatatggaaaaggcagcggcgcggctggtgctggcc
gtgcagacacggcaacgcattgcgatctttggcgattacgatgtggatggcggcgcctca
tccgcgctgctgatcgattggctgcgcaactttggtctgcaggcgaccctatatatcccc
gaccgcattgacgagggctatggccccaatgttccggccatggcggatctggcggcgcgc
cacgacctgatcatctgcgtcgattgcggcaccctctcgcacgaggctttgggcgcggcc
acagccgccgatgtcatcgtactggaccaccacctaggcggcgagaccctgccccctgcc
ctggccgtggtgaacccgaaccggcaggacgaaagcggcgatctgacctatctctgcgcg
gcgggcgtcgtctttttggcgctggtcgaggcgaaccgccagttgcgcgcgggcgggctg
caagggcctgatctgaccagccttctggatctggtcgcgctggcaacggtcgccgatgtg
gcgccgctggttggcctgaaccgtgcattggtgcggcaggggctggcggtcatgggccgc
cgcgcgcgtccgggccttgtggctttggccgatgtggcgcggatcgacagcgcccccagc
agctatcaccttggctatatccttggcccgcgtgtgaacgcgggcggccgtattggccgc
gcggaccttggtgcgcggctgctggccaccaccgacccgcatgaggctgccgccatggcc
gcgcagcttgatgcgctgaacaccgagcggcgggcgattgaatccgctgtccgcgacgcc
gccatcgcgcaggccgaggcccgcggcctcgaggcaccgctggtctgggccgcaagcgag
ggctggcaccccggtgtcgtcggcattgtcgccgcccgtatcaaagaggcgacgaaccgc
ccgagcgtggtgatcggctttgacggcgggatcggcaaaggctcgggccgctctgtcagc
ggcgttgaccttggcgctgcgatccaacgcgttgcggctgagggcctgctgctgaaaggc
ggcggccataagatggcggcgggcctgacggtcacgcgcgagaatttagagcctgccatg
gcacgcctgtcggaactgctggcccgtcagggcgcaggcgcaggtggccccagtgatttg
cgcattgatgcgctgctgatgcccggcgcggcgacggtcgccatgatcgaacagttggaa
caggccgggccgttcggcgcctcggcccccgcgccacgctttgcgctgcccgatgtcgtg
gtgcaatatgtcaaacccgtcggcagcgaccacctgaaggtcacattgggcgatggcctt
ggcgcgcggcttgatgcgatcgcctttaatgccgcgcaatcgccgctgggacatctgctg
acccattccggcagccagcgcgtgcatgtggtcggacggcttgaggtgaaccactggcag
ggccgtgccagcgcccaattgcgcatcgaggatgccgcaaaggcaagcagctga
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