Ketogulonicigenium vulgare WSH-001: KVU_2079
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Entry
KVU_2079 CDS
T01909
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KVU_2079 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvl03021
]
KVU_2079 (rpoA)
03400 DNA repair and recombination proteins [BR:
kvl03400
]
KVU_2079 (rpoA)
Enzymes [BR:
kvl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KVU_2079 (rpoA)
Transcription machinery [BR:
kvl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KVU_2079 (rpoA)
DNA repair and recombination proteins [BR:
kvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KVU_2079 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AEM41918
UniProt:
F9Y5B3
LinkDB
All DBs
Position
complement(2198430..2199458)
Genome browser
AA seq
342 aa
AA seq
DB search
MEGHMIHRNWSELIKPTQLDVRPGADAARQATIVAEPLERGFGLTLGNALRRILLSSLQG
AAITAVQIDNVLHEFSSITGVREDVTDIVLNLKGVAIRMDVEGPRRVSIQVKGPAVVTAG
DISESNGIEILNKDHVICHLDDGASLYMELTVNTGKGYVAADRNKPEDAPIGLIAIDALY
SPVKKVSYDVQPTREGQVLDYDRLTMKIETNGGLSPEDAVAYAARILQDQLSIFVNFDEP
ESALGGAADDGLEFNPLLLKKVDELELSVRSANCLKNDNIVYIGDLIQKTEAEMLRTPNF
GRKSLNEIKEVLSGMGLHLGMDVEEWPPENIEELAKKYEDQF
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atggagggacacatgatccacaggaattggtccgagcttatcaagccgacccaactcgat
gttcgcccgggtgccgatgcggcccgtcaagcgaccatcgttgccgagccgctagagcgt
ggcttcggtctgacgctgggcaatgcgctgcgccgcatcctgctgtcgtcgctgcaaggt
gccgctattacggccgtgcagatcgacaacgtcttgcatgaattctcctcgatcactggc
gtgcgcgaggatgtgactgatatcgttctgaacctgaagggcgtcgccatccgcatggat
gtcgaaggtccgcgtcgtgtgtcgatccaggtcaaaggcccggctgtcgtcacggctggc
gacatcagcgaatcgaacgggatcgagatcctgaacaaggaccatgtgatctgccacctg
gatgatggtgcgtcgctgtacatggaactgaccgtcaacaccggcaaaggctatgtcgcg
gctgaccgcaacaagcccgaagatgcgcccattggcctgatcgccattgatgcgctgtat
tcgccggtcaagaaggtctcgtatgacgtgcagccgacccgcgaaggtcaggtgctggat
tacgaccgtctgacgatgaagatcgaaaccaatggcggcctctcgcccgaagacgcggtg
gcttatgctgcgcgtattttgcaagaccagctgtcgatcttcgtgaacttcgacgagcct
gaatcggctctgggcggcgcggcggatgacggccttgaattcaacccgcttctgctgaag
aaggttgacgagctggagctgtcggtccgttcggcaaactgcctgaagaacgacaatatc
gtctacattggcgacctgatccaaaaaaccgaagccgagatgctccgcaccccgaacttc
ggccgcaagtcgctgaacgagatcaaagaagtgctttcgggcatgggtctgcaccttggc
atggatgtcgaggaatggccgccggaaaacattgaagagctggccaagaaatacgaagac
cagttctaa
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