Ketogulonicigenium vulgare WSH-001: KVU_2172
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Entry
KVU_2172 CDS
T01909
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl00521
Streptomycin biosynthesis
kvl00523
Polyketide sugar unit biosynthesis
kvl00525
Acarbose and validamycin biosynthesis
kvl00541
Biosynthesis of various nucleotide sugars
kvl01100
Metabolic pathways
kvl01110
Biosynthesis of secondary metabolites
kvl01250
Biosynthesis of nucleotide sugars
Module
kvl_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
KVU_2172 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
KVU_2172 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
KVU_2172 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
KVU_2172 (rfbB)
00525 Acarbose and validamycin biosynthesis
KVU_2172 (rfbB)
Enzymes [BR:
kvl01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
KVU_2172 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
adh_short
NmrA
adh_short_C2
Sacchrp_dh_NADP
NAD_binding_10
FAA_hydrolase_N
Motif
Other DBs
NCBI-ProteinID:
AEM42011
UniProt:
F9Y5T6
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All DBs
Position
2291887..2292936
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AA seq
349 aa
AA seq
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MKILITGGAGFIGSAVVRQAVAAGHHVVNLDALTYAACLDNVASVADSPLYAFEQADIRD
AAALEAVFARHAPDAVMHLAAESHVDRSIDGPGAFVETNVMGTYTLLQAARAYWEGRGKP
EGFRFHHISTDEVFGSLPHDPAVKFTEDTPYDPRSPYSASKAASDHLVRAWHETYGLPVV
LTNCSNNYGPFHFPEKLIPVIILNALAGKPLPIYGDGSNIRDWLYVEDHATALLTVLEKG
KLGRSYNIGGENERTNLELVQTLCAILDEKQPKTSGSYADQITFVTDRPGHDARYAIEPE
RIRTELGWRPSVTVEQGLALTVDWYLANESWWQPLLDRHGVGQRLGTKA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcctgattaccggcggcgccggtttcatcggctcggccgtggtgcgacaggcg
gtggcggcgggccatcatgtggtgaaccttgatgcgctaacctatgcagcctgcctcgat
aacgtggcatcggttgcggatagcccgctttatgcctttgaacaggccgacattcgcgat
gccgcagcgctcgaggccgtgttcgcgcgccacgcccccgatgccgtcatgcatctggcc
gccgaaagccatgtggaccgctcgatcgacgggccgggggcttttgtcgaaacgaatgtg
atgggcacctatacgctgctgcaggccgcccgtgcctattgggagggtcgcggcaagccc
gagggtttccgctttcaccatatttcaaccgacgaagtcttcggatcgctgccccatgac
ccggcggtgaaattcaccgaggataccccctacgatccccgcagcccctattccgccagc
aaagccgcgtcggatcatctggtgcgcgcctggcacgaaacctatgggctgccggttgtg
ctgacgaattgttccaacaattacgggcccttccactttcccgaaaagctgatccccgtc
atcatcctgaacgctttggccggtaaacccctgccgatttatggcgatggatcgaacatt
cgcgactggctctatgtcgaggatcacgcgaccgccctgctgacagtgctggaaaagggt
aaactcggccgcagctataatatcggcggcgagaatgagcgcaccaaccttgaactggtg
caaactctctgcgcgattttggacgagaaacagcccaaaaccagcggcagctatgccgac
cagattacctttgtcaccgaccgtcccggccatgatgcacgctatgccattgaacccgaa
cgcattcgcaccgaactcggttggcgcccctcggtcacggtcgagcagggccttgcgctg
acggtagattggtatttggccaatgaaagctggtggcagccgctgctggaccggcatggc
gtcggccaaaggctgggcaccaaggcctga
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