Ketogulonicigenium vulgare WSH-001: KVU_2186
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Entry
KVU_2186 CDS
T01909
Name
(GenBank) Exonuclease, putative
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvl03016
]
KVU_2186
Enzymes [BR:
kvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
KVU_2186
Transfer RNA biogenesis [BR:
kvl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
KVU_2186
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AEM42025
UniProt:
F9Y5V0
LinkDB
All DBs
Position
2306622..2307233
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AA seq
203 aa
AA seq
DB search
MANFLYQNDLPDDLDLGPVIAIDCETMGLNPHRDRLCLVQISGGDGNAHMIQISPGQRSA
PNLARMLEDANILKLFHYGRFDIAAMYHAFGALAQPVYCTKIASKMVRTYTERHGLKFLL
QDLIGVDISKHQQQSDWGAASLTPAQLDYAASDVLYLHRLRAHLDALLAREGRTGLAQAC
FDFLPTRARLDLEGWQENDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggccaatttcctgtatcaaaacgacctgcccgacgacttggatcttggccctgttatt
gccatcgactgcgagacaatgggcctgaacccgcaccgcgaccggctgtgtctggtgcag
atctcgggcggggatggcaatgcccatatgatccagatcagccccggccagcgcagtgcg
ccaaatcttgcgcggatgctggaagacgccaatatcctgaagctgttccactatggccgc
tttgacattgccgcgatgtatcacgcttttggcgcgctggcgcagccggtctattgcacc
aagatcgcgtcgaaaatggtgcgcacctataccgaacgccatgggctgaaattcctgctg
caggatctgatcggggtcgatatctcgaaacatcagcagcagtcggattggggcgcggcc
agcctgacgcccgcccaactggattacgcggcatccgatgtgctgtatctgcaccgcctg
cgcgcgcatctggacgcgctgcttgcgcgcgagggacgcacaggccttgcgcaggcctgc
tttgattttctgccgacgcgggctagactcgaccttgaaggttggcaagaaaacgacatc
tttgcacattga
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