Ketogulonicigenium vulgare WSH-001: KVU_2249
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Entry
KVU_2249 CDS
T01909
Symbol
rho
Name
(GenBank) transcription termination factor Rho protein
KO
K03628
transcription termination factor Rho
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KVU_2249 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvl03021
]
KVU_2249 (rho)
03019 Messenger RNA biogenesis [BR:
kvl03019
]
KVU_2249 (rho)
Transcription machinery [BR:
kvl03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KVU_2249 (rho)
Messenger RNA biogenesis [BR:
kvl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KVU_2249 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
OB_RNB
NACHT
AAA_25
AAA
Motif
Other DBs
NCBI-ProteinID:
AEM42088
UniProt:
F9Y691
LinkDB
All DBs
Position
complement(2373726..2375000)
Genome browser
AA seq
424 aa
AA seq
DB search
MSEEFRLNLSDLKARSPKDLLALAEELEIENASTMRKGDMMFAILKERAEEDWTIGGDGV
LEVLQDGFGFLRSPEANYLPGPDDIYVSPDMIRQYSLRTGDTVSGVMQEPSETERYFALI
TVETINFEDPDRARHKVAFDNLTPLYPDERLKMEIEDPTIKDRSARIIDLVAPIGKGQRA
LIVAPPRTGKTVLLQNIAHSIEVNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDE
PATRHVAVAEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANAL
QRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRV
FPAVDILKSGTRKEDLLVDAKDLQKTYVLRRILNPMGTTDAMDFLISKLKQTKSNSDFFD
SMNS
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaattccgtttgaacctttccgacctgaaggcgcgtagccccaaggatctg
ctggcgctggccgaagagctggaaatcgaaaacgcatcgacgatgcgtaaaggcgacatg
atgttcgccatcctgaaagagcgcgccgaagaggattggaccatcggcggcgacggtgtg
ctggaagtgctgcaagacggctttggtttcctgcgcagccccgaggcaaactatctgccc
ggccccgatgacatttatgtcagccctgacatgatccgccaatatagcctgcgcaccggc
gacaccgtatcgggcgtgatgcaagagccgtccgagaccgagcgttatttcgccctgatc
acggtcgagacgatcaacttcgaagatcccgaccgcgcccgccacaaggttgctttcgac
aacctgacgccgctttatcccgacgagcgcctgaagatggagatcgaggacccgactatc
aaggatcgctcggcccggatcattgatctggtcgcaccgattggtaagggccagcgcgcg
ctgatcgtggcgccgccgcgcaccggtaaaaccgtgctgctgcagaacatcgcccattcg
atcgaggtgaaccaccccgagtgctatctgatcgtgctgctgatcgacgaacgtcccgag
gaagtgaccgacatgcagcgttcggtgaagggcgaggttgtgtcctcgacctttgacgag
cctgcgacccgtcacgtcgctgtggctgagatggtcattgaaaaagccaaacgtctggtc
gagcataagcgcgatgtcgtcatcttgctggattcgatcacgcgccttggtcgcgcctat
aacacggttgtgccgtcctcgggcaaggtgctgaccggcggtgtggatgcaaacgccctg
caacgccccaagcgcttctttggtgctgcgcgtaatatcgaagaaggcggcagcctgacc
attatcgccaccgcgctgatcgataccggcagccgcatggacgaggtgatctttgaagaa
ttcaagggcaccggtaacagcgagattgtgctggaccgtaaggtcgcagataagcgcgtc
ttcccggctgtcgatattctgaaatcgggcacccgtaaggaagacttgctggttgatgcg
aaagatctgcagaaaacctatgtgctgcgccgtattctgaacccgatgggcacaacggat
gcgatggacttcctgatttccaagctgaagcagaccaagtccaattccgacttcttcgac
tcgatgaattcgtaa
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