Ketogulonicigenium vulgare WSH-001: KVU_2310
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Entry
KVU_2310 CDS
T01909
Symbol
xthA1
Name
(GenBank) Exodeoxyribonuclease III, putative
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
kvl
Ketogulonicigenium vulgare WSH-001
Pathway
kvl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KVU_2310 (xthA1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvl03400
]
KVU_2310 (xthA1)
Enzymes [BR:
kvl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
KVU_2310 (xthA1)
DNA repair and recombination proteins [BR:
kvl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
KVU_2310 (xthA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AEM42150
UniProt:
F9Y6N0
LinkDB
All DBs
Position
complement(2441443..2442231)
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AA seq
262 aa
AA seq
DB search
MTFTLATWNINSVRLRAELVARLLREELPDVLCLQECKSPVELIPTEIFRALGYPYMIAR
GQKGYNGVAILSRLPMREVGAHDFADLGHARHIAGQLDNGVTIHNFYVPAGGDIPDREQN
IKFGQKLDYLTQMRDHFHGEKPQKAILVGDLNIAPREDDVWNHKALLKIVSHTPIEVDHL
GAAMDSGDWVDITRANIPEGRLYSWWSYRSPDWDAADKGRRLDHIWATRDIAAAGHSSRV
LRPARGWEGPSDHAPVFATFDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
atgacctttacccttgccacctggaacattaactcggttcgcctgcgggcggaactggtt
gcgcggctgctgcgcgaagagctgccggatgtgctatgcctgcaagaatgcaaatccccg
gtcgaactgatcccgaccgagattttccgcgcgcttggctatccctatatgatcgcgcgc
ggccaaaagggctataatggtgtcgccatcctgtcgcgcctgcccatgcgcgaggtgggc
gcccatgatttcgccgaccttggccatgcccgccatatcgcgggtcagttggacaatggc
gtcacgatccacaacttctatgtccccgcaggcggcgatattcccgaccgcgagcagaac
atcaaattcggccaaaagctggattacctgacccagatgcgcgaccattttcacggggaa
aagccgcaaaaggcgattctggtcggagatctgaacatcgccccgcgcgaggacgacgtc
tggaatcacaaggcgctgctgaaaatcgtcagccacactccgatcgaggtcgatcatctg
ggcgccgcgatggattcgggcgattgggtggatatcacccgcgccaatatccccgagggg
cgtctttatagctggtggtcctatcgctcgcccgattgggatgctgcggataaggggcgg
cggctggatcacatctgggcgacacgcgacattgcggcggcgggccattccagccgcgtc
ttgcgcccggcgcgcggatgggaaggcccatcggatcacgcaccggttttcgcgaccttt
gacctttaa
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