KEGG   Ketogulonicigenium vulgare WSH-001: KVU_PA0078
Entry
KVU_PA0078        CDS       T01909                                 
Symbol
hsdR2
Name
(GenBank) type I site-specific deoxyribonuclease restriction subunit
  KO
K01153  type I restriction enzyme, R subunit [EC:3.1.21.3]
Organism
kvl  Ketogulonicigenium vulgare WSH-001
Brite
KEGG Orthology (KO) [BR:kvl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:kvl02048]
    KVU_PA0078 (hsdR2)
Enzymes [BR:kvl01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.3  type I site-specific deoxyribonuclease
     KVU_PA0078 (hsdR2)
Prokaryotic defense system [BR:kvl02048]
 Restriction and modification system (R-M system)
  Type I R-M system
   KVU_PA0078 (hsdR2)
SSDB
Motif
Pfam: SWI2_SNF2 HSDR_N ResIII T1R_D3-like DEAD DUF87
Other DBs
NCBI-ProteinID: AEM42498
UniProt: F9YAU6
LinkDB
Position
p1:61109..64147
AA seq 1012 aa
MNHARHSEGAFETVIEATMLANGAVPEPTSGFNRDRAIFPETVLSFIRDTQPKEWKALEA
LHGEKTGTQVLADLTTWMDREGSLATLRHGFKCYGKTLRVAFFKAAHGLNPELEARYAAN
RVGITRQLHFSKVSEKSLDVALSVNGIPVASVELKNPMTGQTVEHALHQYRHDRDPREPI
FEFKRRMLVHFAADTDTVFMTTRLAGAATHFLPFNKGNNGGAGNAPDPKGRSYRTAYLWE
EVLQPDSLLDLLARFIHLQIEEKRDDQGRKVKKETMIFPRYHQLEAVRLLVDQAQREGVG
SNYLIEHSAGSGKSNTIGWLTHRLASLHDDKNARVFDSVVVITDRVVLDKQLQDTIYQFE
HKHGVVQKIDESSRQLAEALESAVPIIITTLQKFPFVSRQLAKMAEERGEANSGTLRSRH
CAVIIDEAHSSQGGETATDLKEVLGGQGLREEAAKYMAENDEEDVEELYRSMAKRGRQAN
LSFFAFTATPKHKTFKVFGRDDKPAHRYTMRQAIEEGFILDVLKHYTTYATYFRLLRASE
DDPNVERKKAARALARFLKLHPHNIAQKTEVMIEHFHAATQHKIGGRAKAMVITGSRLEA
VRYKQSFDRYIKDKGYAIKSLVAFSGIVTDDRLKDVAYTEEGMNLGVREKELPEVFSTQE
YQVLLVAEKYQTGFDQPLLHTMYVDRRLAGIQAVQTLSRLNRIHPLKEDTFVLDFVNERD
EIREAFKTYFEGAEVGEDVDPARMYEIKSELDADGIYIGEDVERFSAVYFKPRQRQSPND
HQLMNAALDPCVARFKELQQETPDEAELWRGKLLAFCSLYGFLSQIIPYQDTDLERLYVF
LRHLATKLPKRGAGPSYQFDDEVRLEYYRLQKISEGSISLSNGQANRLDGPSEVGTGVLH
EEAVPLSRLIDVVNDRFGTDFNQADQLFFDQIVEAAISDVALKQAATVNPGDKFELVFKN
LLEALFVERMDQNEEIFARFMNDKSFQKVVTGWLSSEAYRKLNHSLEDTPAD
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgaaccacgctcggcattcagaaggtgcattcgagaccgtcattgaagccacgatgttg
gcaaatggagccgtgccggaacctacgtcggggttcaaccgtgatcgtgccatcttcccg
gagactgtcctctccttcatccgcgacacacagccgaaggaatggaaagctctggaggca
ctccacggagaaaagaccggcacccaagtccttgccgatctgaccacatggatggatcga
gagggttctctggccaccttgcggcacggtttcaagtgctacggcaagactctgcgtgtg
gccttctttaaggcggcgcatgggctgaaccccgagttggaagctcgctacgccgccaac
cgcgtcgggatcacgcggcaactccatttctcaaaggtctccgaaaagtccttagacgtt
gcgctgagcgtaaacggcattccagtcgcgtcggtcgaactcaagaacccgatgaccgga
cagacggtcgagcacgccttgcaccagtaccgccatgaccgcgatccgcgcgagccgatc
ttcgagttcaagcgtcgtatgctggtccacttcgcagccgacaccgacacggtgttcatg
actacacggcttgcgggagcggccacccatttcctgcccttcaacaaaggcaacaacggt
ggtgccggtaatgcgcccgatcccaagggtcgcagttaccgcacggcctatctctgggaa
gaggtgttgcagccggacagtctgctcgatctgttggcacgcttcatccacctgcagata
gaggaaaagcgcgacgatcagggccggaaggtaaaaaaggagacgatgatctttccgcgt
taccaccagctcgaagcggttcgcttgctggttgatcaggcgcagcgcgaaggcgtaggc
agcaactacctaatcgagcattccgccggtagcggcaagagcaacaccatcggctggctc
acacaccggctggcgtcacttcatgacgacaagaacgcacgcgtgttcgacagcgtggtc
gtgatcaccgatcgcgtggtgctggataagcagttgcaggacacgatctatcagttcgag
cataagcacggcgtcgtgcagaagatcgacgaaagttcgcgccagctggcggaagccctg
gaaagcgccgtgccgatcatcatcactaccttgcagaagttccccttcgtctcgcgtcag
ctcgctaagatggcggaggagcgcggggaagcgaatagcggcacgctaaggtcacggcac
tgcgccgttatcatcgacgaagcgcacagctcgcagggcggcgaaacggcgaccgacctc
aaggaggttctgggcggccagggccttcgcgaggaagccgcgaaatacatggccgagaac
gacgaagaggatgtagaggaactctaccgctcgatggcgaagcgcgggcggcaggcgaac
ttgagcttctttgccttcaccgcaacaccgaagcacaagaccttcaaggttttcggacgc
gatgacaagcccgcccatcgctacacaatgcggcaggcgatcgaggaagggttcatcctc
gacgtgctgaagcactacacgacctacgccacctatttccggctcctaagggcgagcgaa
gacgatccgaacgtcgagcggaagaaggctgcccgcgcgctcgcccgctttctcaagctg
catcctcacaatatcgcccagaagacggaggtgatgatcgagcatttccacgccgcgacc
cagcacaagatcggtggccgtgccaaggcgatggtaatcacgggttcgcgcctcgaagcg
gtccgctacaagcagagctttgaccgctatattaaggataagggctatgccatcaagtcg
ctggtggccttctccggcattgtcacggacgacaggctgaaggatgtcgcctacaccgaa
gaagggatgaatctcggcgtccgtgagaaggaactgccagaggttttctccacgcaggag
tatcaggtgctgctcgtcgccgagaagtaccaaacgggcttcgaccaacccttgttgcac
acaatgtatgtcgacaggcggcttgctggcattcaggcagttcaaacgctatcgcgcctg
aaccgtatccatccgctgaaagaagacaccttcgtcctcgatttcgtcaacgaacgagat
gaaatccgcgaggcattcaagacctatttcgagggcgccgaggtaggcgaggacgtcgac
ccagcccgaatgtatgagataaagagcgaactcgacgccgacggaatctatatcggcgag
gacgttgaacgctttagcgccgtctatttcaagccgcgccaacgccagagcccgaacgat
catcagttgatgaatgcggcacttgatccgtgcgtggcccgtttcaaggagcttcagcaa
gaaactccggacgaggctgagctgtggcgcggcaagctattggccttctgtagcctctat
gggttcctcagccagatcattccctatcaggatacggaccttgagcgcctgtatgttttc
ctgcgtcacctcgcgaccaagctgccgaagcgcggcgctgggccgtcttaccagttcgat
gacgaggtgcggcttgagtattatcgtctgcagaagatcagcgaaggctcgatcagcctg
agcaatggccaggccaaccggctcgatggtccctcggaagtcggaaccggcgtgctgcat
gaggaagcggttccactgtcgcggctcatcgatgtcgtcaacgaccgttttggtactgat
tttaatcaggccgaccagttgttcttcgatcagattgtcgaagcggcaatctctgatgtg
gccctgaagcaggcggcgactgtcaatccgggtgacaagtttgagctggtgttcaagaat
ttgctggaagcactgttcgtggagcgaatggaccagaacgaagaaattttcgcccgcttc
atgaacgacaagtccttccaaaaagtcgttacgggttggctgtcgtctgaagcctatcgc
aagctcaaccattcgttagaagatacacctgctgattaa

DBGET integrated database retrieval system