Klebsiella variicola DSM 15968: SP68_05295
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Entry
SP68_05295 CDS
T03641
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kvq
Klebsiella variicola DSM 15968
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvq03016
]
SP68_05295
Enzymes [BR:
kvq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SP68_05295
Transfer RNA biogenesis [BR:
kvq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SP68_05295
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AJE88702
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All DBs
Position
2010540..2011667
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AA seq
375 aa
AA seq
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MNYQMITTDDGLRAVCEAASAASAVALDTEFVRTRTYYPQLGLLQLFDGTQVSLIDPLTI
SDWAPMRELLLNQDVTKYLHAGSEDLEVFLNAFNLMPQPLIDTQILAAFCGRPMSWGFAS
MVEEYSGVALDKSESRTDWLARPLTERQCEYAAADVWYLLPIASQLMAETDRAGWLSAAL
DECRLMQQRRQEVVDPAEAWRDIGNAWQLRTRQLGCLQLLAEWRLRKARERDLAVNFVVR
EEHLWSVARYMPTSLGELDSLGLSGSEIRFHGKTLISLVEKAQALPESALPAPLQNLIDM
PGYRKAFKDIKALVQEVSADKGVSAELLASRRQINQLLNWHWQLKTQAGEPELISGWRGE
LMAGRLKSLLNDYPR
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
ttgaactatcagatgatcaccaccgacgatggcctgcgcgctgtttgcgaagcggcaagc
gcggcctccgccgtcgctctggatacggaatttgtccgtacccgtacctactatccgcag
ctgggcctgctgcagctgttcgacggcacccaggtctctctgatcgatcccttgacgatt
agcgactgggcgccgatgcgtgagctgctgctcaaccaggatgtgactaaatatctgcat
gccggtagtgaggatttagaagtcttcctcaatgcgttcaacctgatgccgcagccgctg
atcgacacccagatcctggcggcgttctgcggccgcccgatgtcctggggctttgcctcc
atggtggaagagtattccggagtggcgctggataaaagtgaatcccgcaccgactggctg
gcgcgcccgctgaccgagcgtcagtgtgaatacgccgcagctgacgtctggtacctgttg
ccgatcgccagccaattaatggcggagaccgaccgcgcaggctggctatcggcggcgctg
gacgaatgtcgtctgatgcagcagcgtcgtcaggaggtggttgacccggccgaggcctgg
cgcgacatcggcaacgcctggcagctgcgtacccgccagctgggctgcctgcagctgctg
gcagagtggcgtctgcgcaaagcgcgtgagcgcgacctggcggtgaactttgtggtgcgg
gaagagcatctgtggagcgtggcgcgctatatgcccaccagcctcggcgagctcgacagc
ctcgggttgtccggcagtgaaattcgcttccacggcaaaacgttgattagcctggtcgag
aaagcccaggcgctgccggagtcggccctgccggcgccgctgcagaacctcattgacatg
ccgggttaccgtaaagcctttaaagatattaaagcgctggtgcaggaagtgagcgccgat
aagggcgtgagcgcggaactgctggcctcgcgtcggcagatcaaccagttgctgaactgg
cactggcagttgaaaacgcaagccggtgagcctgagctgatttccggctggcgtggcgaa
ctgatggccgggcggctgaagtcgctgttaaacgactatccgcgctag
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