Klebsiella variicola DSM 15968: SP68_10280
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Entry
SP68_10280 CDS
T03641
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SP68_10280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvq03400
]
SP68_10280
Enzymes [BR:
kvq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
SP68_10280
DNA repair and recombination proteins [BR:
kvq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SP68_10280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AJE89625
LinkDB
All DBs
Position
926593..929970
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AA seq
1125 aa
AA seq
DB search
MLRVYHSNRLDVLEALMEFIVERQRLDDPFQAEMVLVQSTGMAQWLQMTLASRFGIAANI
EFPLPASFIWDMFVRVLKDIPGESAFSKQSMSWKLMTLLPQHLEEDDFILLRQYLSDDGD
KRKLFQLAARVADLYDQYLVYRPEWLMRWEAGQRVEGLGDAQQWQAPLWQALVSYTAELG
QPQWHRANLYQRFISTLEKADEPPAGLPSRVFICGISALPPVYLQALQALGKHVDVYVLF
TNPCRYYWGDIKDPAFLAKLLSRQRRHHREARALPLFRDTEQAPGLFNDAGEQDVGNPLL
ASWGKLGRDYIYLLAGLERYEELDAFVDIAPDNLLHNLQSDILELRNAAVAGQSAEAFAH
SRDKRPLALDDRSLSIHVCHSPQREVEVLHDRLLAMLEADPTLTPRDIIVMVADIDSYSP
YIQAVFGAASGDRWLPWAISDRRARESHPVLQAFITLLSLPDSRFASEDVLALLDVPVLA
ARFNITEEGLRYLRQWVNESGVRWGMDDDNVRELDLPATGQHTWRFGLTRMLLGYAMDSR
EGEWQSVLPYDESSGLIAELVGNLASLLMQLNLWRRGLAQQRPLAEWLPVCRDLLNDFFL
PDSETEAALALIEQQWLAVIDSGLEAQYGDQVPLTLLRDELAQRLDQQRISQRFLAGPVN
ICTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMSQKPQRGDRSRRDDDRYLFLEAL
MSAEQTLYISYIGRSIQDNSERFPSVLVQELVDYIGQSHCLAGDEELDCDASEARVKAYI
THLHTRMPFDVANFQEDENKSYAREWLAAAGQQGEAHSDFIQPLTAPPIDSLPFEQLLRF
WQHPVRAFFQQRLRVNFRAEEDDIPDDEPFTLEGLSRYQLNQQLLNTLIEEQDDSAMFRR
FRAAGELPYGAFGELVWETQRLEMQALAERVMAERQQAQSMEIDLQCGGVNLTGWLQQVQ
PDGLLRWRPSLLSVSQGMQLWLEHLVYCASGGTGESRLFVRKEGEWRFPALAPAEAQAYL
NALVDGYLLGMSQPLLLLPESGGAWLKACYDAEKDVILMDEETQQKARSKFLQTYEGNMV
VSGEGADIWYQRLWRSLEPAHYEEIIAQTQRYLLPLYRYHQSTQI
NT seq
3378 nt
NT seq
+upstream
nt +downstream
nt
atgttaagggtataccactcaaaccggctggatgttctcgaggcgttgatggaatttatc
gtcgagcgccagcggctggatgacccttttcaggccgaaatggtgctggtgcagagtacc
ggtatggcgcagtggctgcagatgaccctggcctcgcgcttcggaattgccgccaatatc
gagttcccgctgccggcgagctttatctgggacatgttcgtgcgcgtcctgaaagatatt
cctggcgaaagcgccttcagcaagcagagcatgagctggaagctgatgaccctcctgccg
cagcacctggaggaagacgattttatcttgctgcgccagtatctgagcgatgacggcgac
aagcgcaaactgtttcaactcgccgcccgggtggcggacctctatgaccagtacctcgtc
tatcgcccggagtggctgatgcgctgggaggccggccagcgggtggaaggtctcggcgat
gcccagcagtggcaggcgccgctgtggcaggcgctggtgagctataccgccgagctgggg
caaccgcagtggcaccgcgccaatctctaccagcgctttatcagtaccctggaaaaagcg
gacgaaccgcccgccgggctgccgtcgcgcgtcttcatctgcgggatttccgcgctgccg
ccggtctatcttcaggccctgcaggcgctgggtaagcatgtcgatgtctacgtattgttt
accaacccctgccgctactactggggagacattaaggatccggcgttcctggcgaagctg
ctgtcgcgccagcggcgccatcaccgcgaggcgcgcgcgctacccctgtttcgcgacacc
gagcaggcgccggggttgtttaatgacgctggggaacaggatgtcggcaacccgttgctc
gcctcctggggcaaactggggcgcgattatatctacctgttggcggggctggagcgctat
gaggagctggacgcctttgtcgatattgcccccgataacctgttgcataacctgcaatcg
gatatcctcgaactgcgcaacgcggcggtggccgggcagagcgcagaggcgttcgcccac
agtcgcgacaaacgtccgctggcgctggatgaccgcagcctgagcattcacgtctgccac
agtccgcagcgcgaagtggaggttctgcacgatcggctactggcgatgctggaggcggat
ccgacgctcaccccgcgggatatcatcgtcatggtggcggatatcgacagctacagtccc
tatattcaggcggtgtttggcgcggccagcggcgatcgctggttgccgtgggcgatctcc
gaccgtcgcgcccgcgagtcgcacccggtgctgcaggcgtttatcacgctgctctcgctg
ccggacagccgcttcgccagcgaagatgtgctggcgctgctggacgtgccggtgctggcg
gcgcgctttaatatcacggaagaagggctgcgctacctgcgccagtgggtgaacgagtcc
ggcgtccgctggggaatggatgacgacaacgtccgcgagctggacctgcctgcgaccggg
cagcatacctggcggttcggcctcacccgtatgctgttgggctacgccatggacagccgc
gagggagagtggcagtcggtgctgccgtatgacgaatccagcggtttgatcgccgaactg
gtgggcaacctcgcgtcgctgctgatgcagcttaatctgtggcgacgcggccttgcccag
cagaggccgctggcggagtggctgccggtctgtcgcgatctgctgaatgactttttcctg
ccggacagcgagaccgaagcggcgctggcactgattgagcaacaatggctggcggttatt
gatagcggtctggaagcacagtatggcgaccaggtgccgctgacgctactgcgcgatgag
ctggcccagcgtctcgatcagcagcggatcagccagcgctttcttgctggcccggtcaac
atctgcaccctgatgccgatgcgctctattcctttcaaagtggtttgcctgctggggatg
aacgacggggtttatccgcgaacgctaccgccgctgggctttgatttaatgagccagaag
ccgcagcgcggcgaccgcagccggcgcgatgatgaccgctatctgttcctcgaagcgctg
atgtccgccgaacagacgctgtatatcagctatatcggacgttcgatccaggacaacagc
gagcgctttccttcggtgctggtgcaggagctggtggattacattggccagagccactgt
cttgctggcgacgaagagcttgactgcgacgccagcgaagcccgggtcaaagcctatatc
acccatctgcatacgcgcatgccgttcgacgtcgctaatttccaggaagacgagaacaag
agctacgctcgtgaatggctggccgccgccggccagcagggagaggcgcatagcgatttt
atacagccgctcaccgcgccgccgattgacagcctgccgttcgagcagctcttacgcttc
tggcagcacccggttcgcgcgttctttcagcagcgtttgcgggtcaatttccgcgccgaa
gaggacgatattccagacgacgagcccttcactcttgaagggctgagccgttatcaactg
aatcagcaactgctcaatacgcttatcgaggagcaggacgactcagccatgttccgccgc
ttccgcgccgccggcgagctgccgtatggcgcctttggcgagctggtctgggagacgcag
cgcctggagatgcaggctctggccgagcgggtgatggccgagcgccagcaggcgcagagt
atggagatcgatctgcagtgcggcggcgtgaacctgaccggctggctgcagcaggtgcag
ccggacggtctgctgcgctggcggccttcgctgctgagcgtctcccaggggatgcaactt
tggctggaacaccttgtctactgtgccagcggcggcaccggcgagagccggctgtttgtg
cggaaagagggagagtggcgcttcccggcgctggcgcccgccgaggcgcaggcgtacctt
aatgcgctggtggatggctatttgctggggatgtcgcagccgctgctgctgctgccggaa
agcggtggcgcctggctgaaagcctgttacgacgccgaaaaggatgtcatcttaatggac
gaagagacgcagcagaaagcgcggagcaaattcctgcagacctacgaaggtaatatggtg
gtcagcggggagggcgccgatatctggtatcaacgcctgtggcgttcgctggagccggcg
cattacgaagaaattattgctcagacgcagcgttatctgttaccgctatatcgttaccat
cagtccacacaaatttaa
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