Klebsiella variicola DSM 15968: SP68_10770
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Entry
SP68_10770 CDS
T03641
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03410
Base excision repair
kvq03430
Mismatch repair
kvq03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SP68_10770
03430 Mismatch repair
SP68_10770
03440 Homologous recombination
SP68_10770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvq03400
]
SP68_10770
DNA repair and recombination proteins [BR:
kvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
SP68_10770
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SP68_10770
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
SP68_10770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
AJE89719
UniProt:
A0A7H4MS36
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All DBs
Position
828611..830344
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AA seq
577 aa
AA seq
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MKQQIQLRRREAVDGVDLPADLPPLLQRLYASRGVRSAQELERSVKGMLPWTQLTGVEKA
VEMLHEAFEKGLHIVVVGDFDADGATSTALSVLALRALGYGNVSYLVPNRFEDGYGLSPE
VVDQAHARGAQMIMTVDNGISSHAGVDHAHALGIPVLVTDHHLPGETLPAAEAIVNPNLR
DCDFPSKSLAGVGVAFYLMLALRTFLRDKGWFDARGIAAPNLAELLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIKALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNIGEARVLANELDALNQTRKEIEQGMQAEALTLCQQLERSSDTLPGGLAM
YHPQWHQGVVGILASRIKERFHRPVIAFAPTGDGTLKGSGRSIQGLHMRDALERLDTLYP
GLILKFGGHAMAAGLSLEEARFEEFQQRFGELVTEWLDPALLQGEVVSDGPLAATEMSME
VAQMLRDAGPWGQMFPEPLFDGRFRLLQQRLVGERHLKVMVEPVGGGPLLDGIAFNVDTS
IWPDNGVREVQLAYKLDINEFRGNRSLQLIIDHLWPN
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaacagatacaactacgacgccgtgaggcggttgacggcgtcgatctccctgcc
gacctgccgccgctgctgcagcggctgtatgccagccgcggggtgcgcagtgcgcaggag
ctggagcgcagcgtcaaaggcatgctgccgtggacgcagctcaccggcgttgaaaaagcg
gttgaaatgctgcatgaggctttcgagaaagggttacatattgtggtggtcggcgatttt
gatgccgacggcgccaccagtaccgcccttagcgtgctggcgctacgcgcgctgggctac
ggtaacgtctcctatctggtgcccaaccgttttgaagacggctacggtttaagcccggaa
gtggtcgatcaggcgcacgctcgcggcgcgcagatgatcatgaccgttgataacggcatt
tcgtcacatgccggtgtcgatcacgcccatgcgttgggcattccggtgctggtgaccgat
caccacctgccgggcgagacgctaccggcggccgaggccatcgttaaccctaacctgcgc
gattgtgacttcccgtcgaaatcactggccggggtgggggtggcgttttatctgatgctg
gcgctgcgtactttcctgcgcgataaaggctggttcgacgcccgcggcatagccgcgccg
aacctggctgagctgctggatctggtggcgctgggcaccgtcgcggacgtcgtgccgctg
gatgccaacaaccgcatcctgacctggcaggggttaagccgcattcgcgccggcaaatgt
cggccaggcattaaagcgctgctggaaattgccaaccgtgacccgcaaaaactggcggcc
agcgacctcggtttcgcccttgggccgcgcctcaatgcggcggggcggctggatgatatg
tccgtcggcgtggcgctgctgctgtgcgataacatcggcgaagcgcgcgtgttagccaat
gagcttgatgcgctcaaccagacgcgtaaagagattgaacaggggatgcaggccgaagcg
ttgaccctgtgtcagcaactggaacgcagcagcgacaccctgcctggcgggctggcgatg
taccatccgcagtggcatcagggggtggtcggcattctggcatcacgcattaaggagcgc
ttccatcgcccggttatcgcttttgcgccgaccggcgacggcacgctgaaaggttccggc
cgctctattcaggggctgcacatgcgcgatgcgctggagcgcctggatacgctctatccg
ggactgatcctgaagttcggcggccatgctatggcggcgggtttatcgctggaagaggcg
cgctttgaggagtttcaacagcgcttcggcgaactggtgaccgagtggctggatcccgca
ttattgcagggcgaggtggtctccgacggcccgctggcggcgacggagatgagcatggaa
gtggcgcagatgctgcgcgatgccggaccatgggggcagatgttcccggaaccgttgttt
gatggccgttttcgcctgctgcagcagcggctggtaggcgagcgtcacctgaaagtgatg
gtcgaaccggttggcggcggcccgctgctggacggtattgctttcaacgttgatacttcc
atttggccggacaacggcgtgcgcgaagtgcagttagcctacaagctcgacatcaacgag
ttccgcggcaaccgcagcctgcagctgatcatcgatcacctctggccaaattga
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