Klebsiella variicola DSM 15968: SP68_12010
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Entry
SP68_12010 CDS
T03641
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SP68_12010
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvq03019
]
SP68_12010
03016 Transfer RNA biogenesis [BR:
kvq03016
]
SP68_12010
Enzymes [BR:
kvq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SP68_12010
Messenger RNA biogenesis [BR:
kvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SP68_12010
Transfer RNA biogenesis [BR:
kvq03016
]
Prokaryotic type
tRNA degradation factors
SP68_12010
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_2
KH_2
aRib
SLS1_KH2
DUF4172
Motif
Other DBs
NCBI-ProteinID:
AJE89953
UniProt:
A0A087FVV8
LinkDB
All DBs
Position
565212..567347
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AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQDFFPLT
VNYQERTYAAGKIPGGFFRREGRPSEGETLIARLIDRPVRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQEELKSSKLDLVVA
GTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQIVIQNINDLVKEAGKPRWDWQPEAVNE
ALNARVAALAESRLSDAYRITDKQERYAQVDVIKSETIATLVAEDETLDANELGEILHAI
EKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPTIDE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPVKAAVAGIAMGLVKEGDNFVVLSD
ILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKEIMQVALNQAKGARLHILGVMEQA
INAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKIAAT
DGDKAQHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTPSAAAPEAPVAEQGE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgttcgtaaattccagtacggccagcataccgtaaccctggaaacc
ggcatgatggcgcgccaggcaacggccgctgtgatggttagcatggatgacaccgcggta
ttcgtgaccgttgtgggtcagaaaaaagcgaagccaggccaggactttttcccgctgact
gttaactaccaggagcgtacttacgctgccggtaaaatcccgggtggtttcttccgtcgt
gaaggccgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgcccggttcgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgccaccgtcgtttccgtt
aacccgcaggttaacccggatatcgtcgcgatgatcggcgcttccgctgcgctgtccctg
tctggtattccgttcaatggcccaatcggcgccgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccaacccaggaagaactgaagtccagcaaactggatctggtggttgcc
ggtactgaagcggccgtgctgatggttgaatccgaggctgaactgctgagcgaagaccag
atgctgggcgcggtggtcttcggccacgagcagcagcagattgttattcagaacatcaac
gacctggtgaaagaagccggtaaaccgcgttgggactggcagccggaagccgtcaacgaa
gcgctgaacgcgcgcgtggctgcgctggctgaatcccgcctgagcgatgcttaccgtatc
accgacaaacaagagcgttacgctcaggttgacgtgatcaaatctgaaaccatcgccacg
ctggtagcagaagatgaaaccctggacgctaacgagctgggtgaaatcctgcacgccatc
gagaaaaacgtggttcgtagccgcgtactggcaggcgagccgcgtatcgatggccgcgaa
aaagacatgatccgtggtctggacgttcgtaccggcgtactgccgcgtactcatggttcc
gcactgttcacccgtggcgaaacgcaggcgctggttaccgcgactctgggtaccgcacgc
gacgcgcagaacatcgacgaactgatgggcgagcgcaccgactccttcctgttccactac
aacttccctccgtactccgtaggcgaaactggcatggtgggttctccgaagcgtcgtgaa
atcggtcacggtcgtctggctaagcgcggcgtattggccgtgatgccgactatcgacgaa
ttcccgtacaccgttcgcgtggtgtctgaaatcaccgaatccaacggttcttcttccatg
gcctccgtctgtggcgcctctctggcgctgatggatgcgggtgtgccggtgaaagccgcc
gttgcgggtatcgcaatgggtctggtgaaagaaggcgacaacttcgtcgttctgtctgac
atcctgggtgacgaagaccaccttggcgatatggacttcaaagttgcgggttcccgcgac
ggtatctctgcgctgcagatggatatcaaaattgaaggtatcaccaaagaaatcatgcag
gttgctctgaaccaggctaaaggtgcgcgtctgcacatcctgggcgtgatggagcaggcg
attaacgcgccgcgcggcgatatctctgaattcgcaccgcgtatccacaccatcaagatc
aacccggacaagatcaaagacgttatcggtaaaggcggttctgttatccgtgccctgacc
gaagaaaccggcaccaccatcgaaatcgaagatgacggtaccgtgaagatcgcagcgacc
gacggcgataaagcacagcatgctatccgtcgtatcgaagagatcaccgctgagatcgaa
gttggccgcatctacaatggtaaagtgacccgtatcgttgactttggcgcgttcgttgcc
atcggcggcggtaaagaaggtctggttcacatctcgcagatcgctgataagcgcgttgag
aaagtgactgactacctgcagatgggtcaggaagtgccggttaaggttctggaagttgac
cgccagggccgtgttcgtctgagcatcaaagaagcaactgaacagactccgtctgccgca
gcgccggaagctccggtcgccgagcagggcgagtaa
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