Klebsiella variicola DSM 15968: SP68_12025
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Entry
SP68_12025 CDS
T03641
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kvq
Klebsiella variicola DSM 15968
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvq03016
]
SP68_12025
Enzymes [BR:
kvq01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SP68_12025
Transfer RNA biogenesis [BR:
kvq03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SP68_12025
Prokaryotic type
SP68_12025
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AJE89956
UniProt:
A0A087FVW0
LinkDB
All DBs
Position
563607..564551
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDVHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPVCLG
EATKFSQYLLDSDKRYRVIAKLGQRTDTSDADGQVVEERPLTFSDEQLAAALDSFRGETQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGDELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLAVSKYPVERMVTLEQLQALVDQAAAQDIPAAQLLDPL
LMPMDSPASDYPLVAIPETSAVYFKNGNPVRQSGAPLNGLVRVMENESGKFLGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggccgcgacgtgcacggcgtattgttgctggacaagcct
cagggcgcttccagcaacgatgtgctgcagaaagtaaagcgtatttataacgccaaccgc
gctggccacaccggcgcgctggatccgctggcgaccggtatgctgccagtgtgtcttggc
gaagcgaccaagttttcccagtatctgctggactccgataagcgttatcgcgtgatcgcc
aaactgggccagcgcacggatacctccgatgccgacggtcaggtggtggaagagcgtccg
ctaacctttagcgacgagcagctggcggcggcgctggatagtttccgcggcgagacgcag
caggtaccgtcgatgtactcggcgctgaagtatcagggcaagaagctgtacgagtatgct
cgtcagggcattgaggtcccgcgtgaagcccggccgattacggtctatgagctgctgttt
attcgccatgaaggcgatgaactggagctggagatccactgctcgaaaggcacctacatc
cggacgattatcgatgatttaggtgaaaagctcggctgcggcgcgcacgtgattttcctg
cgtcgcctggcggtgagcaaatacccggttgagcggatggtgaccctcgagcagctgcag
gcgctggtcgatcaggcggcagcgcaggatattcctgccgcgcagctgcttgatccgctg
ctgatgccgatggacagcccggcatcggactatccgctggtggcgattccggagacctcc
gcggtttactttaaaaacggtaacccggttcgtcagtcaggcgcgccgcttaacgggctg
gtgcgggtgatggaaaacgaatccggcaagtttctcggcatgggcgaaattgacgatgaa
ggccgcgtggcgccgcgtcgtctggtggtggaatacccggcgtaa
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