Klebsiella variicola DSM 15968: SP68_14045
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Entry
SP68_14045 CDS
T03641
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SP68_14045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvq03400
]
SP68_14045
Enzymes [BR:
kvq01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
SP68_14045
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
SP68_14045
DNA repair and recombination proteins [BR:
kvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SP68_14045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
zf-B_box
zf-C2H2_OTU1_C
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
AJE90341
UniProt:
A0A2N4Z3W8
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All DBs
Position
140444..141253
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AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPHLVGATILHAVVRNGRLRWPVSEEIYRLSDVPVLSVRRRAKYLL
LELPDGWIIVHLGMSGSLRILSEELPAEKHDHVDLVMSNGKVLRYTDPRRFGAWLWTKTL
EDHPVLAHLGPEPLSDEFNADYLQQKCAKKKTAIKPWLMDNKLVVGVGNIYASESLFSAG
IHPDRLASSLSREECEQLVKVIKLVLLRSIEQGGTTLKDFLQSDGKPGYFAQELQVYGRK
GEPCRICGTPVVGTKHAQRATFYCRQCQK
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaggttgaaaccagccgccgcggcatcgagccgcacctggttggc
gcaaccattctgcacgccgtcgtgcgcaacggacggctgcgctggccggtttccgaagag
atttatcgcctgagcgacgttccggtgctcagcgtgcggcgtcgtgccaaatacctgctt
ctggaactgccggacggctggatcatcgtccatctcgggatgtctggaagcctgcgtatc
ctgagcgaagagctaccggccgaaaaacacgatcacgttgacctggtcatgagtaatggc
aaggtgctgcgctataccgatccgcgccgctttggcgcctggctgtggaccaaaacgctg
gaagaccatccggtactggcccaccttggcccggagccgctcagcgatgaatttaacgcc
gactatcttcagcagaaatgcgcgaagaaaaaaactgcgatcaaaccctggctgatggat
aacaagctggtggtaggggtcggcaatatctacgccagcgagtcgctgttctcggccggg
atccatcccgacaggttggcttcttcactgtcgcgggaagagtgtgagcagctggtgaaa
gtgattaagctggtcctgctgcgttcgatagagcagggcggcaccacgctgaaggatttc
ctgcaaagcgatggcaagccgggctattttgcccaggagctgcaggtctatggccgcaag
ggcgaaccgtgccggatctgcggcacgccggttgtcgggaccaaacatgcccagcgggcg
accttttattgccgtcagtgccagaagtag
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