Klebsiella variicola DSM 15968: SP68_15685
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Entry
SP68_15685 CDS
T03641
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03420
Nucleotide excision repair
kvq03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
SP68_15685
03430 Mismatch repair
SP68_15685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvq03400
]
SP68_15685
Enzymes [BR:
kvq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SP68_15685
DNA repair and recombination proteins [BR:
kvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
SP68_15685
MMR (mismatch excision repair)
Other MMR factors
SP68_15685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AJE90640
UniProt:
A0A264BY54
LinkDB
All DBs
Position
complement(5308245..5310407)
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAASRTNMLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTTQGGMWVGTFHGLAHRLLRAHHLDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNDLDEARFVVNRIKTWQENGGALEQCAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLKEKVLAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRAMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGVEEGMFPSQMALDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPQECVEEVRLRATVSRPVNHQRLG
APIAESDTGYKLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgtgaagccgtagcggcc
tcgcgcaccaatatgctggttctggcaggggcgggcagtggtaagacgcgcgttctggtg
caccgtatcgcctggctgctgagcgtggagaactgctcgccgtactcgattatggcggtg
acctttaccaacaaagcggcggcggagatgcgccaccgtatcggccagctgatgggcact
acccagggcggcatgtgggtaggcaccttccacggcctcgcgcaccgtctgctgcgtgcg
catcatctggacgccaacctgccgcaggatttccaaatcctcgacagcgaagaccagctc
cgtctgctgaagcgtctgattaaggcgatgaacctcgatgagaagcaatggccgccgcgt
caggcgatgtggtacatcaacagccagaaagatgaagggctgcgcccgcatcacattcag
agctacggcaacccggtcgagcagacctggcagaaggtctatcaggcctaccaggaggcc
tgcgaccgcgccgggctggtggatttcgccgagctgctgctgcgcgcgcacgagctgtgg
ctgaacaagccgcatatcctgcagcactatcgtgagcgtttcaccaatatccttgtcgat
gaattccaggacaccaacaacatccagtacgcctggatccgcctgctggcgggcgatacc
ggcaaggtgatgatcgtcggcgatgatgaccagtcgatttacggctggcgcggtgcgcag
gttgagaacattcagcgcttcctcaacgacttccccggcgcggaaactattcgcctggag
cagaactatcgttcaaccagcaatattcttagcgctgccaacgccctgattgaaaacaac
aacgggcgcctgggcaaaaagctgtggaccgacggtgccgacggcgagccgatttcgctg
tactgcgccttcaacgatctcgacgaagcgcgcttcgtggtgaaccgcattaaaacctgg
caggagaacggcggcgcgctggagcaatgtgccattctctatcgcagtaacgcccagtcg
cgcgtgctggaagaggcgctcctgcaggccagcatgccgtaccgtatctacggcggtatg
cgcttcttcgaacgtcaggaaatcaaagatgcgctctcttacctgcgcctgattgccaac
cgtaacgacgatgcagcgtttgagcgggtggtcaatacgccgactcgcggcatcggcgat
cgtacgctggacgtggtacgccagacgtcgcgcgatcgtcagctgacgctgtggcaggcc
tgccgcgagctactgaaagagaaagtgctggctggccgtgccgccagcgctctgcagcgc
tttatggagttgattgacgcgctggcgcaggaaaccgccgatatgccgctacatgttcag
accgatcgggtgattaaagactccgggctgcgcgcgatgtacgagcaggagaaaggcgag
aagggccagacccgtattgaaaacttagaggaactggtgacggcgacgcgccagttcagc
tacaacgaagaagatgaagacctgatgccgctgcaggcgttcctctcccacgccgcgctg
gaagcgggcgaggggcaggcggacacctggcaggacgcggttcaactgatgaccctgcac
tcggcgaaagggctggaattcccgcaggtgtttatcgtcggcgtcgaagaagggatgttc
ccgagccagatggcccttgatgaaggcggccgcctggaagaagagcgtcgcctggcctac
gttggcgtgacgcgcgccatgcagaagctgacgctgacctacgccgaaacccgccgtctg
tacggcaaagaggtttaccatcgcccgtcgcgctttattggagaactgccgcaggagtgc
gtagaagaagtgcgtctgcgggccacggtgagccgtccggtaaaccaccagcgactgggg
gcgccgattgccgagagcgataccggctacaagttaggtcagcgggtgcgccatccgaag
tttggcgaaggcactatcgtcaacctcgaaggcagcggcgagcacagccggctgcaggtg
gcttttcagggccagggaatcaaatggctggtggcggcttacgcgcggcttgagacggtg
taa
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