Klebsiella variicola DSM 15968: SP68_15945
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Entry
SP68_15945 CDS
T03641
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SP68_15945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvq03021
]
SP68_15945
03400 DNA repair and recombination proteins [BR:
kvq03400
]
SP68_15945
Enzymes [BR:
kvq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SP68_15945
Transcription machinery [BR:
kvq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SP68_15945
DNA repair and recombination proteins [BR:
kvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SP68_15945
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
AJE90683
UniProt:
A0A087FLA7
LinkDB
All DBs
Position
complement(5254957..5258985)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGKRPQVLDIPYLLSIQLDSFQKFIEQDPEGQYGLEAAFRSVFPIQ
SYSGNSELQYVSYRLGEPVFDVKECQIRGVTYSAPLRVKLRLVIYEREAPEGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLFVRIDRRRKLPATIILRALNYTTEQILDLFFEKVVFEIRDNKLQME
LVPERLRGETASFDIEANGKVYVEKGRRITARHIRQLEKDDIKHIEVPVEYIAGKVASKD
YIDEATGELICPANMELSLDLLAKLSQSGHKRIETLFTNDLDHGPYISETVRVDPTNDRL
SALVEIYRMMRPGEPPTREAAESLFENLFFSEDRYDLSAVGRMKFNRSLLRDEIEGSGIL
SKDDIIEVMKKLIDIRNGKGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDTLMPQDMINAKPISAAVKEFFGSSQLSQFMDQNNPLSEITHKRRISALGPGGLTR
ERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSVYAQTNEYGFLETPYRKVTDGVVT
DEIHYLSAIEEGNYVIAQANSNLDENGHFVEDLVTCRSKGESSLFSRDQVDYMDVSTQQV
VSVGASLIPFLEHDDANRALMGANMQRQAVPTLRADKPLVGTGMERAVAVDSGVTAVAKR
GGTVQYVDASRIVIKVNEDEMYPGEAGIDIYNLTKYTRSNQNTCINQMPCVSLGEPIERG
DVLADGPSTDLGELALGQNMRVAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELACVS
RDTKLGPEEITADIPNVGEAALSKLDESGIVYIGAEVTGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDSSLRVPNGVSGTVIDVQVFTRDGVEKDKRALEIEEMQLKQAKKDL
SEELQILEAGLFSRIYAVLVSGGVEAEKLDKLPRDRWLELGLTDEEKQNQLEQLAEQYDE
LKHEFEKKLEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PIEDMPHDANGTPVDIVLNPLGVPSRMNIGQILETHLGMAAKGIGDKINAMLKQQQEVAK
LREFIQRAYDLGADVRQKVDLNTFSDEEVLRLAENLRKGMPIATPVFDGAKEAEIKELLQ
LGDLPTSGQITLFDGRTGEQFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLG
GKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHQMEPGMP
ESFNVLLKEIRSLGINIELEDE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcctataccgagaaaaaacgtattcgtaaggattttggtaaacgtccacaa
gttctggacataccttatctcctttctatccagcttgattcgttccagaagtttatcgag
caagatcctgaagggcagtatggtctggaagcagccttccgttccgtattcccgattcag
agctacagcggtaattcagagctgcaatacgtcagctaccgtctgggcgaacctgttttt
gatgttaaagaatgtcagatccgtggcgtgacttattctgcaccgctgcgcgtaaaactg
cgtctggtgatctacgagcgcgaagcgccggaaggcaccgttaaagacatcaaagaacaa
gaagtctacatgggcgaaatcccgctcatgaccgacaacggtacctttgttatcaacggt
accgagcgtgttatcgtttctcagctgcaccgtagcccgggcgtcttctttgacagtgac
aaaggtaagacccactcctccggtaaggtcctgtataacgcacgtatcatcccttaccgc
ggttcctggctggacttcgaattcgacccgaaagacaacctgttcgttcgtatcgaccgt
cgtcgtaaactgccggcaaccatcattctgcgcgcgctgaattacaccactgagcagatc
cttgacctgttcttcgagaaagtggtctttgaaattcgcgacaacaagctgcagatggag
ctggtaccggagcgtctgcgcggtgaaaccgcctccttcgatatcgaagccaacggtaaa
gtgtacgttgagaaaggccgtcgtattactgcgcgccacattcgccagctggaaaaagac
gatatcaaacatatcgaagttccggttgagtacatcgcgggtaaagttgcttctaaagac
tacatcgacgaagcgaccggcgaactgatctgcccggcgaacatggagctgagcctggat
ctgctggctaaactgagccagtccggccacaagcgtatcgaaacgctgttcaccaacgat
ctggaccacggtccgtacatttctgaaacggtacgcgtcgacccgaccaacgatcgtctg
agcgcgctggtagaaatctaccgcatgatgcgccctggtgagccgccgactcgcgaagcg
gctgaaagcctgtttgagaacctgttcttctccgaagaccgctacgatctgtccgcggtt
ggtcgtatgaagttcaaccgttctctgctgcgcgacgaaatcgaaggttccggtatcctg
agcaaagacgacatcatcgaagtgatgaagaagctcatcgatatccgtaacggtaaaggc
gaagtcgatgatatcgaccacctcggcaaccgtcgtatccgttccgttggcgaaatggcg
gaaaaccagttccgcgttggcctggtacgtgtagagcgtgcggttaaagagcgtctgtct
ctgggcgatctggataccctgatgcctcaggatatgatcaacgccaagccgatttccgca
gcagtgaaagagttctttggttccagccagctgtcccagtttatggaccagaacaacccg
ctgtctgagattacgcacaaacgtcgtatctccgcactcggcccaggcggtctgacccgt
gaacgcgcaggcttcgaagttcgagacgtacacccgacgcactacggtcgcgtatgtcca
atcgaaacgcctgaaggtccgaacatcggtctgatcaactccctgtccgtgtacgcacag
actaacgaatacggtttccttgagaccccgtatcgtaaagtgaccgacggtgtggttacc
gatgaaattcactacctgtctgctatcgaagaaggcaactacgttattgctcaggcgaac
tccaacctggatgaaaacggccacttcgtagaagacctggttacctgccgtagcaaaggc
gaatccagcttgttcagccgcgaccaggttgactacatggacgtatccacccagcaggtg
gtatccgtcggtgcgtccctgatcccgttcctggagcacgatgacgccaaccgtgcattg
atgggtgcgaacatgcaacgtcaggcggttccgactctgcgcgctgataagccgctggtt
ggtaccggtatggaacgtgctgttgccgttgactccggtgttactgcggtggctaaacgt
ggcggtaccgttcagtacgtggatgcttcccgtatcgttatcaaagttaacgaagacgag
atgtacccgggcgaagcaggtatcgacatctataacctgaccaagtacacccgttctaac
cagaacacctgcatcaaccagatgccttgcgtgtccctgggcgaacccattgagcgcggc
gacgtgctggccgacggcccgtccaccgaccttggtgaactggcgctgggtcagaacatg
cgcgtagcgttcatgccgtggaacggctacaacttcgaagactccatcctcgtctccgag
cgtgttgtccaggaagaccgtttcaccaccatccacattcaggaactggcgtgcgtgtcc
cgtgacaccaagctggggccggaagagatcaccgctgacatcccgaacgtgggtgaagct
gcgctctctaaactggatgagtccggtatcgtttatatcggcgcggaagtgaccggcggc
gacattctggttggtaaggtaacgccgaaaggtgaaacccagctgacgccggaagagaaa
ctgctgcgtgcgatcttcggtgagaaagcgtctgacgttaaagactcttctctgcgcgta
ccgaacggtgtctctggtaccgttatcgacgttcaggtctttacccgtgatggcgtagaa
aaagacaaacgtgcgctggaaatcgaagagatgcagctgaagcaggcgaagaaagacctg
tctgaagaactgcagatcctcgaagccggtctgttcagtcgtatctacgcggtgctggtc
tccggtggcgttgaagctgagaagctcgacaaactgccgcgcgatcgctggctggaactg
ggcctgaccgacgaagagaaacagaatcagctggagcaactggctgagcagtatgacgaa
ctgaaacacgagttcgagaaaaaactcgaagcgaaacgccgtaaaatcacccaaggcgac
gatctggcaccgggtgtgctgaagattgttaaggtatacctggccgttaaacgccgtatc
cagcctggtgataagatggcaggccgtcacggtaacaagggtgttatctctaagatcaac
ccgatcgaagatatgccgcacgatgctaacggtacgccggtagatatcgtactgaacccg
ctgggcgtaccgtctcgtatgaacatcggtcagatcctggaaactcacctgggtatggct
gcgaaaggcatcggcgataagatcaacgccatgctgaaacagcagcaagaagtcgcgaaa
ctgcgcgaattcatccagcgtgcttacgatctgggcgctgacgttcgccagaaagttgac
ctgaataccttcagcgatgaagaagttctgcgtctggctgaaaacctgcgtaaaggcatg
ccgatcgcaacgccggtattcgacggtgcgaaagaagctgaaatcaaagagctgctgcag
ctgggcgacctgccgacttccggtcagatcaccctgtttgacggccgcaccggtgaacag
ttcgaacgtccggtaaccgtgggttacatgtacatgctgaaactgaaccacctggtcgac
gacaaaatgcacgctcgttccaccggttcctacagcctggttactcagcagccgctgggt
ggtaaggcgcagttcggtggtcagcgcttcggtgagatggaagtgtgggcgctggaagct
tatggcgcggcctacaccctgcaggaaatgctcaccgttaagtctgatgacgtgaacggt
cgtaccaagatgtataaaaacatcgtggacggcaaccaccagatggaaccgggcatgccg
gaatccttcaacgtactgttgaaagaaatccgctcgctgggcatcaacatcgaactggaa
gacgagtaa
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