Klebsiella variicola DSM 15968: SP68_15950
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Entry
SP68_15950 CDS
T03641
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
SP68_15950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvq03021
]
SP68_15950
03400 DNA repair and recombination proteins [BR:
kvq03400
]
SP68_15950
Enzymes [BR:
kvq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
SP68_15950
Transcription machinery [BR:
kvq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
SP68_15950
DNA repair and recombination proteins [BR:
kvq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
SP68_15950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
AJE90684
UniProt:
A0A087FLA6
LinkDB
All DBs
Position
complement(5250657..5254880)
Genome browser
AA seq
1407 aa
AA seq
DB search
MKDLLKFLKAQTKTEEFDAIKIALASPDMIRSWSFGEVKKPETINYRTFKPERDGLFCAR
IFGPVKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIELACPTAHIWFLKSL
PSRIGLLLDMPLRDIERVLYFESYVVIEGGMTNLERNQILTEEQYLDALEEFGDEFDAKM
GAEAIQALLRNMDLEQECEQLREELNETNSETKRKKLTKRIKLLEAFVQSGNKPEWMILT
VLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLDLAAPDIIVRNEKRMLQ
EAVDALLDNGRRGRAITGSNKRPLKSLADMIKGKQGRFRQNLLGKRVDYSGRSVITVGPY
LRLHQCGLPKKMALELFKPFIYGKLELRGLATTIKAAKKMVEREEAVVWDILDEVIREHP
VLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAYNADFDGDQMAVHVPLTLEAQLEA
RALMMSTNNILSPANGEPIIVPSQDVVLGLYYMTRDCVNAKGEGMVLTGPKEAERIYRAG
LASLHARVKVRITEYEKDENGEFVAKTSLKDTTVGRAILWMIVPKGLPFSIVNQALGKKA
ISKMLNTCYRILGLKPTVIFADQTMYTGFAYAARSGASVGIDDMVIPEKKYEIISEAEAE
VAEIQEQFQSGLVTAGERYNKVIDIWAAANDRVSKAMMDNLQTETVINRDGQEEQQVSFN
SIYMMADSGARGSAAQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFISTHGAR
KGLADTALKTANSGYLTRRLVDVAQDLVVTEDDCGTLEGITMTPVIEGGDVKEPLRDRVL
GRVTAEDVLKPGTADILVPRNTLLHEHWCDLLEENSVDSVKVRSVVSCDTDFGVCAHCYG
RDLARGHLINKGEAIGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAESSIQVKNKGSIRL
SNAKSVVNSSGKLVITSRNTELKLIDEFGRTKESYKVPYGSVMAKGDGEQVAGGETVANW
DPHTMPVITEVSGFVRFTDMIDGQTITRQTDELTGLSSLVVLDSAERTSGGKDLRPALKI
VDAQGNDVLIPGTDMPAQYFLPGKAIVQLEDGVQISSGDTLARVPQESGGTKDITGGLPR
VADLFEARRPKEPAILAEISGIISFGKETKGKRRLVITPVDGSEPYEEMIPKWRQLNVFE
GERVERGDVVSDGPEAPHDILRLRGVHAVTRYITNEVQDVYRLQGVKINDKHIEVIVRQM
LRKATIESAGSSDFLEGEQVEYSRVKIANRELEANGKVAATYSRDLLGITKASLATESFI
SAASFQETTRVLTEAAVAGKRDELRGLKENVIVGRLIPAGTGYAYHQDRMRRRAAGEQPA
APQVSVEEASANLAELLNAGLGGSDND
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
gtgaaagacttattaaagtttctgaaagcgcaaactaaaaccgaagagtttgatgcgatc
aaaattgctctggcatcgccagacatgatccgttcatggtctttcggtgaagttaaaaag
ccggaaaccattaactaccgtacgttcaagcctgagcgtgacggtctgttctgtgctcgt
attttcgggccagtaaaagactatgagtgcctgtgcggtaagtacaagcgcctgaaacac
cgcggtgtgatctgtgagaagtgcggcgttgaagtgacccagactaaagtgcgtcgtgag
cgcatgggccacatcgagctggcatgcccgacggcgcacatctggttcctgaaatcgctg
ccgtcccgtatcggcctgctgctggatatgccgctgcgcgatatcgaacgtgtactgtac
ttcgaatcctacgtggttatcgaaggtggcatgaccaacctcgaacgcaaccagattctg
actgaagagcagtacctggatgcgctggaagagttcggtgacgaattcgacgcgaaaatg
ggtgcggaagcgatccaggcgctgctgcgcaatatggatctggagcaggaatgcgaacag
ctgcgtgaagagctgaacgaaaccaactccgaaaccaagcgtaaaaagctgaccaagcgc
attaaactgctggaagcgttcgttcagtctggcaacaagccggaatggatgatcctgacc
gttctgccggttctgccgccagatctgcgtccgctggttccgctcgatggcggccgtttt
gcgacttctgacctgaacgatctgtatcgtcgcgtcattaaccgtaacaaccgtctgaaa
cgtctgctggatctggctgcgccggacatcatcgtacgcaacgaaaaacgtatgctgcag
gaagcggttgacgccctgctggataacggccgtcgcggtcgtgcgatcaccggttctaac
aaacgtcctctgaaatctttggccgatatgatcaaaggtaaacagggtcgtttccgtcag
aacctgctcggtaagcgtgttgactactccggtcgttctgttatcaccgtaggtccatac
ctgcgtctgcatcagtgcggtctgccgaagaaaatggcgctggagctgttcaaaccgttc
atttacggcaagctggaactgcgtggcctggccaccaccatcaaagccgctaagaaaatg
gttgagcgcgaagaagccgttgtttgggatatcctggacgaagttatccgcgaacacccg
gtactgctgaaccgtgcgccaacgctgcaccgtttaggtatccaggcattcgaaccggtt
ctgatcgaaggtaaagctattcagctgcacccgctggtttgtgctgcctataacgccgac
ttcgatggcgaccagatggctgttcacgtaccgctgacgctggaagcccagctggaagcg
cgtgcgctgatgatgtctaccaacaacatcctgtccccggcgaacggcgaaccaatcatc
gttccgtctcaggacgttgtactgggtctgtactacatgacccgtgactgtgttaacgcc
aaaggcgaaggcatggtgctgactggcccgaaagaagcggagcgtatttatcgcgccggt
ctggcctctctgcatgcgcgcgttaaagtgcgtatcactgaatacgaaaaagacgagaat
ggtgaattcgtcgcgaagactagcctgaaagacacgaccgttggccgtgccattctgtgg
atgatcgtaccgaaaggtctgccgttctctatcgtgaaccaggcgctcggtaagaaagcg
atctccaagatgctgaacacctgttaccgtattctgggcctgaaaccgaccgttattttt
gcggaccagacgatgtacaccggctttgcttatgcagcgcgttcaggtgcatccgttggt
atcgatgacatggtcatcccggagaaaaaatacgaaatcatcagcgaagcggaagcggaa
gttgctgagattcaggaacagttccagtctggtctggtcaccgcgggcgagcgctacaac
aaagttatcgatatctgggctgcggcgaacgatcgtgtatccaaagcgatgatggataac
ctgcaaaccgaaaccgtgattaaccgtgacggtcaggaagagcagcaggtttccttcaac
agcatctacatgatggccgactccggtgcgcgtggttctgcggcacagattcgtcagctg
gctggtatgcgtggtctgatggcgaagccggatggctcgatcatcgaaacgccgatcacc
gcgaacttccgtgaaggtctgaacgtactccagtacttcatctccacccacggtgcgcgt
aaaggtctggcggataccgcactgaagacagcgaactccggttacctgactcgtcgtctg
gttgacgttgcccaggacctggtcgtcactgaagacgactgcggcaccctggaaggcatc
accatgacgccggttatcgaaggtggcgacgttaaagagccgctgcgcgatcgcgtactg
ggtcgtgtgactgctgaagacgttctgaagccgggtaccgcggacattctggttccacgc
aacacgctgctgcatgagcactggtgtgacctgctggaagagaactccgttgactccgtc
aaagttcgttccgttgtatcctgtgacaccgactttggtgtatgtgcgcactgctatggt
cgtgacctggcgcgtggccacctcatcaacaaaggtgaggctatcggcgttatcgcggca
cagtccatcggtgagccgggtacacagctgacgatgcgtacgttccacatcggtggtgcg
gcatctcgtgcggctgctgaatccagcatccaggtgaaaaacaaaggtagcatccgtctg
agcaacgcgaagtcggttgtgaactccagcggtaaactggttatcacctcgcgtaacacc
gagctgaaactgatcgacgaattcggtcgtaccaaagaaagctataaagtgccttacggc
tccgttatggcgaaaggcgatggcgaacaggttgccggcggtgaaaccgttgcaaactgg
gatccgcataccatgccggttatcaccgaagtgagtggtttcgtccgcttcactgacatg
atcgacggccagaccattactcgtcagaccgacgagctgaccggtctgtcttcgctggtg
gttctggattccgcagaacgtacctccggtggtaaagatctgcgtccggcgctgaaaatt
gttgatgctcagggcaacgacgttctgatcccaggcaccgatatgcctgctcagtacttc
ctgccgggtaaagcgattgttcagctggaagatggcgtacagatcagctctggtgacacc
ctggcgcgtgttccgcaggaatccggcggtaccaaggacatcaccggtggtctgccgcgc
gttgcggacctgttcgaagcacgtcgtccgaaagagccggcaatcctggctgaaatcagc
ggcatcatttccttcggtaaagaaaccaaagggaaacgtcgtctggttatcaccccggta
gacggtagcgaaccgtacgaagagatgattccgaaatggcgtcagctgaacgtgttcgaa
ggtgaacgtgtagaacgtggtgacgtggtttccgacggtccggaagcaccgcacgacatt
ctgcgtcttcgtggcgtgcacgcggtaacgcgttacatcaccaacgaagtgcaggacgtt
taccgtctgcaaggcgttaagattaacgataagcacattgaagttatcgttcgtcagatg
ctgcgtaaagcgaccatcgaaagtgctggtagctccgacttcctcgaaggcgagcaggtt
gaatactcccgcgttaagatcgctaaccgcgagcttgaagcgaatggcaaagtggcggca
acctattcccgcgacctgctgggtatcaccaaagcgtctctggcaaccgagtccttcatc
tccgcggcctcgttccaggagaccactcgcgtgctgaccgaagcagccgttgcgggcaaa
cgcgacgaactgcgcggtctgaaagagaacgtcatcgtgggtcgtctgatcccggcgggt
accggctatgcgtaccaccaggatcgtatgcgccgtcgcgcagcgggcgaacagccagct
gccccgcaggtgagcgtagaagaagcgtctgccaacctggcagaactgctgaacgcaggc
ctgggcggttctgacaacgattaa
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integrated database retrieval system
