Klebsiella variicola DSM 15968: SP68_19200
Help
Entry
SP68_19200 CDS
T03641
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kvq
Klebsiella variicola DSM 15968
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvq03016
]
SP68_19200
Enzymes [BR:
kvq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SP68_19200
Transfer RNA biogenesis [BR:
kvq03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SP68_19200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AJE91286
UniProt:
A0A087FUS6
LinkDB
All DBs
Position
4525403..4525939
Genome browser
AA seq
178 aa
AA seq
DB search
MSEPKRLFFALELPSAVQKQIVQWRASHFPEDAGRPVAADNLHLTLAFLGEVSAEKQRAL
AALAGRLRQPGFTLTLDDAGQWLRSRVVWLGTRQPPRGLLQLASMLRAQAARSGCYQSPQ
PFHPHITLWRDARQAVPIPAPGFHWSFPVNEFVLYESSFGRGRTRYTALERYPFHKES
NT seq
537 nt
NT seq
+upstream
nt +downstream
nt
atgtctgagccgaaaaggctgttttttgcgcttgaactgccgtctgccgtccagaaacag
atcgtccagtggcgggcaagccacttccccgaggatgccggcaggcccgtcgcggcggat
aacctccatctgacgctggcgtttctcggcgaggtgagcgcggaaaaacagcgggcgctg
gccgccctcgctggccggctgcgccagccgggctttaccctgacactggacgatgccgga
cagtggctgcgctcgcgggtggtctggctcgggacccgtcagccgccgcgcggcctgctg
cagctcgccagtatgctgcgcgctcaggcggcgcgcagcggctgctatcagagcccgcag
ccgtttcatccgcatattaccctgtggcgcgatgcccgccaggcggtgccgatcccggct
cccggctttcactggtcgtttccggtgaacgagttcgtgctttatgagtccagcttcggc
cgggggcgcacgcgctacacggcgctggaacgttatccgtttcataaggaaagttga
DBGET
integrated database retrieval system
