Klebsiella variicola DSM 15968: SP68_22690
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Entry
SP68_22690 CDS
T03641
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kvq
Klebsiella variicola DSM 15968
Pathway
kvq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SP68_22690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvq03019
]
SP68_22690
Enzymes [BR:
kvq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SP68_22690
Messenger RNA biogenesis [BR:
kvq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SP68_22690
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
HI1480
AAA_19
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
AJE91934
UniProt:
A0A0B7GDF1
LinkDB
All DBs
Position
complement(3783036..3784391)
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVMQGRDLMASAQTGTGKTAGFTLPLL
QRLIDKEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDSVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQGQGRSGQPRSQNS
APRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccaacagcaggcgatcccggcagtaatgcaggggcgcgac
ctgatggccagcgcccagaccggtaccggtaagacggcgggctttaccctgccgctgctg
cagcgcctgattgacaaagagccgcacgcaaagggtcgccgcccggtgcgggcgctgatc
ctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattacagcaag
tacctgaatattcgctcgctggtggtattcggcggcgtgagcatcaacccgcagatgatg
aagctgcgcggtggcgtcgacatcctcgttgccaccccgggccgtctgctggacctcgaa
catcagaacgcggtcagccttgatagcgtggaaatccttgtgctggacgaagcggaccgc
atgctggatatgggctttatccatgacatccgtcgcgtactggctaaactgccggcgcgt
cgacagaacctgctgttctcggcgaccttctccgacgagatcaagggcctggccgagaaa
ctgctgcacaacccgctggaagtggaagtggcgcgtcgcaacaccgcgtccgagcagatc
acccagcacgtccatttcgttgataagaaccgcaagcgcgaactgttgtcgcagctgatc
ggcgaaggcaactggcagcaggtgctggtgtttacccgcaccaagcatggcgccaaccac
ctcgcggagcagcttaataaagacggcatccgcagcgcggcgatccatggcaacaagagc
cagggagcgcgtacccgcgcgctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgtggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtaccggaagattacgtccaccgtatcggccgtaccggccgcgcggcg
gccaccggtgaagccttgtcgctggtgtgcgtggatgagcataagctgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccgcgcatcgcgattgccggctatgagccggatccg
tccattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgtgggcaa
ggtcagggacgcggtggccagggtcagggacgcagcggacagccgcgcagccagaacagc
gccccgcgccgtcaggacggcgaggcgccgaaagcgcgtacgcaggacggcaaaccgccg
cgccgccgtcgtccgcgtaaaccggctggcgaataa
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