Klebsiella variicola DSM 15968: SP68_22885
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Entry
SP68_22885 CDS
T03641
Symbol
rimO
Name
(GenBank) ribosomal protein S12 methylthiotransferase
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
kvq
Klebsiella variicola DSM 15968
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kvq03009
]
SP68_22885 (rimO)
Enzymes [BR:
kvq01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
SP68_22885 (rimO)
Ribosome biogenesis [BR:
kvq03009
]
Prokaryotic type
ribosomal protein modification factors
SP68_22885 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
Methyltransf_2
CLP1_P
YajR_YAM
RNase_II_C_S1
PrmA
Motif
Other DBs
NCBI-ProteinID:
AJE91972
UniProt:
A0A087FSV3
LinkDB
All DBs
Position
3736445..3737770
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AA seq
441 aa
AA seq
DB search
MSNVTHQPKIGFVSLGCPKNLVDSERILTELRTEGYDVVPTYDNADMVIVNTCGFIDSAV
QESLEAIGEALKENGKVIVTGCLGAKEDQIREVHPKVLEITGPHSYEQVLEHVHHYSPKP
KHNPFLSLVPEQGVKLTPRHYAYLKISEGCNHRCTFCIIPSMRGDLVSRPIGEVLAEAKR
LADAGVKELLVISQDTSAYGVDVKHRTGFHNGMPVKTSMVSLCEELAKLGIWVRLHYVYP
YPHVDDVIPLMAEGKILPYLDIPLQHASPRILKLMKRPGSADRQLARIKQWREICPDLTL
RSTFIVGFPGETEEDFQMLLDFLKEARLDRVGCFKYSPVEGATANELADQVPEEVKEERW
NRFMQLQQQISAERLQEKVGREILVLVDEVDEEGAIGRSMADAPEIDGAVYLNGETRVKP
GDVVRVKVEHADEYDLWGTRV
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatgtcacgcaccagccgaaaatcggcttcgtctccctgggctgcccgaaaaat
ctcgtggactcagagcgtatcctgaccgaactgcgcaccgaaggttatgacgtcgtcccc
acctacgacaacgccgatatggtcatcgttaacacctgcggctttatcgatagcgctgtg
caggaatcgctggaagcgatcggcgaagcgttaaaagagaacggcaaggtgatcgtcacc
ggctgcctcggcgcgaaagaggatcagatccgcgaagttcacccgaaggtgctggagatc
accggcccgcacagctatgagcaggtgctggagcacgtccaccactactcgccgaagccg
aagcacaacccgttcctcagcctggtgccggaacagggcgttaagctgacgccgcgtcac
tacgcctacttaaaaatttctgaaggctgcaaccatcgctgcaccttctgcatcatcccg
tccatgcgtggcgatctggtgagccgtccgattggcgaagtgctggcggaagccaaacgc
ctcgctgacgccggcgtgaaagagctgctggtgatttctcaggacacctccgcctacggc
gtcgatgtcaagcaccgtaccggtttccacaacggcatgccggtgaagaccagcatggtc
agcctgtgcgaagagctggcgaagctcggcatctgggtgcgcctgcattatgtttacccg
tatccgcacgtcgacgatgtgatcccgctgatggcggaaggcaaaattctgccgtacctc
gatattccgctgcagcacgccagcccgcgtattctgaagctgatgaagcgtcctggctct
gcagaccgccagctggcgcgcattaagcagtggcgtgaaatttgcccggatctgaccctg
cgctctacctttatcgtgggcttcccgggcgaaacggaagaagatttccagatgctgctc
gacttcctgaaagaggcgcgtctcgaccgcgtcggctgcttcaagtacagcccggttgaa
ggcgccaccgccaacgaactggcggatcaggtgccggaagaggtgaaagaggagcgctgg
aaccgctttatgcagctgcagcagcagatctctgccgagcgtctgcaggagaaagtgggc
cgcgaaatcctggtgctggtggatgaagttgacgaagaaggcgccattggccgcagcatg
gccgacgccccggaaatcgacggcgcggtctacctgaacggcgaaacccgcgttaagccg
ggcgacgtggtgcgggtgaaagtcgagcatgccgacgaatacgacctgtggggtacccgg
gtctag
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