Klebsiella variicola DSM 15968: SP68_25440
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Entry
SP68_25440 CDS
T03641
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
kvq
Klebsiella variicola DSM 15968
Brite
KEGG Orthology (KO) [BR:
kvq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvq03016
]
SP68_25440
Enzymes [BR:
kvq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SP68_25440
Transfer RNA biogenesis [BR:
kvq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SP68_25440
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
S1CSD-TOTE-2
ODP
OSR1_C
Motif
Other DBs
NCBI-ProteinID:
AJE92446
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All DBs
Position
3181149..3183083
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKGTEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
VAVIHSEKDRESAEPETLVEPFLTRFVGKVQKKDDRLAIVPDHPLLKDAIPCRAARGVEH
DFKQGDWAVAEMRRHPLKGDRGFYAELTQFITFSDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLTRRDLTALDFVTIDSASTEDMDDALYVESTADGKLLLTVAIADPTAWIAEGSK
LDKAAKVRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACQMTLAADGTIEDNIEF
FAATIESKAKLAYDDVSDWLEGRGSWQPGSDAIAQQITLLKDVCQRRSEWRQTHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHTGFD
PANTEQLAALLKTHDVHVDPTEVLTLEGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAIIKGETIARPQDDATVQMAERRRLNRM
AERDVADWLYARFLNDKAGTDTRFAAEIIDISRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGEVVYKVTDVIDVTIAEVRMETRSIIARPAV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgctagcgcagcttaaacagcaactgcattcccagacgccg
cgcgcggaaggggtcgttaagggcacggaaaagggctttggcttcctcgaagtggacgct
cagaagagctacttcattccgccgccgcagatgaaaaaagtgatgcatggcgaccgtatc
gtcgcggtgatccattctgaaaaagatcgcgaaagcgccgaaccagaaaccctggttgag
ccgttcctgacccgtttcgtcggtaaagtccagaagaaagacgatcgcctcgctatcgtt
cctgaccatccgctgctgaaagatgccattccctgccgcgccgcccgtggcgttgagcat
gatttcaaacagggtgactgggccgtcgccgagatgcgccgtcatccgttaaaaggcgac
cgcgggttttacgcggagctgacccagttcatcaccttcagcgacgatcacttcgtcccc
tggtgggtaaccctggcgcgccataacctcgaaaaagaagcgccggacggcgtggccacg
gaaatgctcgatgaagggctgacgcgccgcgatttaaccgctctcgacttcgtcactatc
gacagcgccagcaccgaagatatggacgatgcgttgtacgtcgaatccactgctgatggc
aaactgctgctgacggtcgccattgctgacccgaccgcctggattgccgaaggtagcaag
ctggataaggccgcaaaagtgcgcgcctttaccaactatctgccgggcttcaatattcca
atgctgccgcgcgagctgtcagacgacctgtgctccctgcgcgctaacgaagtgcgcccg
gtgctggcctgccagatgactctggcggccgatggcaccatcgaagacaacatcgagttc
tttgccgccaccatcgagtcgaaagccaagctggcctatgacgatgtctctgactggctg
gaaggccgcggcagctggcagccgggcagcgacgcgatcgcgcagcaaattacactgttg
aaggacgtgtgccagcgtcgtagcgaatggcgtcagacccatgcgctggtgttcaaagac
cgtccggactaccgtttcgttcttggcgaaaaaggcgaagtgctggatatcgtcgcggaa
ccacgtcgcattgccaaccgtattgtcgaagagtcgatgatcgccgccaacatctgtgcc
gcccgcgttctgcgcgacaagctcggcttcggcgtttataacgtccataccggcttcgac
ccggcgaataccgaacagctggcggcgctgctgaaaacccacgacgtgcacgtcgacccg
acggaggtgctgacgctggaagggttctgcaagctacgccgggaactggacgcccagccg
accggattcctcgacagccgcatccgccgcttccagtcgtttgcggaaatcagcaccgag
ccgggcccgcactttggcctcggccttgaggcctatgccacctggacctcgccgatccgt
aaatatggcgacatgatcaaccaccgtctgctgaaggccatcatcaaaggcgagaccatt
gcgcgcccgcaggatgatgccaccgtacagatggcggagcgccgtcgtcttaaccggatg
gcagagcgcgacgtcgccgactggctgtatgcccgtttcctcaacgataaagccgggacc
gatacccgttttgcggcggagatcatcgacatcagccgcggcgggatgcgcgtgcgcctg
gtggacaatggcgcggtcgcctttattccggcccccttcctccacgccgttcgcgacgaa
ctggtgtgcagccaggagaacggcaccgtgcagatcaagggcgaggtggtctacaaagtg
actgacgttatcgatgtcaccatcgccgaagtccgcatggaaacccgcagcattattgcg
cgtccggcagtctga
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