Kocuria varians: CIB50_0000023
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Entry
CIB50_0000023 CDS
T06882
Symbol
alr
Name
(GenBank) Alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
kvr
Kocuria varians
Pathway
kvr00470
D-Amino acid metabolism
kvr01100
Metabolic pathways
kvr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CIB50_0000023 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
CIB50_0000023 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kvr01011
]
CIB50_0000023 (alr)
Enzymes [BR:
kvr01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
CIB50_0000023 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
kvr01011
]
Precursor biosynthesis
Racemase
CIB50_0000023 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
TsaE
AAA_25
AAA_18
SH3_18
Motif
Other DBs
NCBI-ProteinID:
QMS55343
UniProt:
A0A7D7Q7J4
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All DBs
Position
complement(27581..29575)
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AA seq
664 aa
AA seq
DB search
MGSVSVMTSWQPQEPSERSAVVDLSAVWHNVVRLTQLARGRKLIAVVKADAYGHGAPEVA
RTALAAGAHMLGTAHVSEAVALRNAGITAPVIAWLHTMSTDFDEALHRDVRLGVSGWEFD
AVLQAARRTGVTAVVHLKLDSGLGRNGATPRQWPDLVERAARAQQEGLLTVEGVFTHLAV
ADEPGRPETQEQLDALTEAVRTARRAGLTPSLVHAANTPGLLSADQLADPDSMLRDAVRV
GLGIYGLSPFEDRTPEEFGLIPAMTLRARVANVKAVPRDSGVSYGLSYRTARDTHLALIP
LGYADGVPRVATGAPVRIGGRVYPVVGRIAMDQCVVDLALGRTVTPEGVPAGEPVVDEAV
DPLVHVGDEAVLFGAGDHPSVTEWANAAGTINYEVVTRISPRVPREYTSHSHLTLGDVTV
SRSASALAAHSLPQDPRPTRASDGEAFEQPNWTLTLHPGSAEDTQRIAERLAPHLHAGDL
VMLNGELGAGKTTFTQGLGRGLGVREGIISPTFVLSRRHPNLPDGPRPGGPDLVHVDAYR
LDTAADVDTIDLEDTLDTCVTVVEWGTSKVEHLSGSRLVVDFVRPQGVLPAAGEHPAAPT
LAYQRHAGDVDGDDNHDGDVGDGAVAQALQALTDEWEGEEQDGDEPRTLILRGYGPRWSD
RLDL
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgtgagtgtgatgacgtcgtggcagccccaggaacccagcgagcgcagtgcg
gtggtggatctctccgccgtgtggcacaacgtggtgaggctcacgcagctcgccaggggc
cggaaactgatcgcggtggtcaaggcggacgcctacggccacggcgccccggaggtggcg
cgcacggcgctcgccgcgggcgcgcacatgctgggcacggcgcacgtgtccgaggccgtg
gcgctgcgcaacgcggggatcaccgctcccgtcatcgcgtggctgcacacgatgtccacg
gacttcgacgaagcgctgcaccgtgacgtccgcctgggcgtcagcggctgggagttcgac
gccgtgctgcaggccgcgcggcgcacgggcgtcaccgcggtggtgcacctgaagctcgac
tccggcctcggccgcaacggcgccaccccgcggcagtggccggacctcgtggagcgtgcg
gcccgtgcccagcaggagggcctgctcaccgtggagggggtcttcacgcacctggccgtg
gcggacgagcccggccgccccgagacgcaggagcagctcgacgccctcacggaggccgtt
cgcacggcccgccgcgccgggctcacgccctcgctcgtgcacgcggccaacaccccgggc
ctgctctccgcggaccagctcgcggacccggactccatgctccgggacgcggtgcgcgtg
ggtctgggcatctacggtctgagcccgttcgaggaccgcacgcccgaggagttcgggctg
atccccgccatgacgctgcgcgcccgcgtggccaacgtgaaggccgtgccccgggacagc
ggcgtctcctacggactgagctaccgcaccgccagggacacgcacctggcgctgatcccc
ctgggctacgcggacggcgtgccccgcgtggccacgggcgccccggtgcgcatcggcggc
cgggtgtaccccgtggtggggcggatcgcgatggaccagtgcgtggtggacctcgcgctg
gggcgcacggtcaccccggagggcgtccccgcgggggagccggtggtggacgaggccgtg
gacccgctcgtgcacgtgggggacgaggccgtgctcttcggcgcgggcgaccacccctcc
gtgaccgagtgggcgaacgccgcgggaaccatcaactacgaggtggtcacgcggatctcc
ccgcgcgtgccccgcgagtacacgagccacagccacctgacgctcggcgacgtgacggtc
tcccgcagcgcgagcgccctggccgcccacagcctgccgcaggacccgcgccccacgcgg
gcctcggacggggaggccttcgagcagcccaactggacgctcaccctgcacccgggcagc
gccgaggacacgcagcggatcgccgagcgtctcgcaccgcacctgcacgcgggggacctg
gtgatgctcaacggagagctcggcgcgggcaagaccacgttcacccagggcctgggccgc
gggctgggcgtgcgggaagggatcatctcgcccacgttcgtgctcagccggcgccacccc
aacctgcctgacggtccccgccccggcggcccggacctcgtgcacgtggacgcctaccgg
ctggacaccgccgcggacgtggacacgatcgacctcgaggacaccctggacacgtgcgtc
acggtggtcgagtggggcacctccaaggtggagcacctcagcgggtcccggctggtcgtg
gacttcgtgcggccgcagggcgtcctgcccgccgcgggggagcacccggctgcgcccacc
ctggcctaccaacggcacgcgggcgacgtcgacggcgacgacaaccacgacggcgacgtc
ggggacggtgccgtggcgcaggcgctgcaggcgctcaccgacgagtgggagggcgaggag
caggacggcgacgagccgcgcaccctgatcctgcggggctacgggccccgctggtcggac
cgcctggacctctga
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