Kocuria varians: CIB50_0000037
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Entry
CIB50_0000037 CDS
T06882
Symbol
tmk_1
Name
(GenBank) Thymidylate kinase
KO
K22468
polyphosphate kinase [EC:
2.7.4.34
]
Organism
kvr
Kocuria varians
Pathway
kvr00190
Oxidative phosphorylation
kvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
CIB50_0000037 (tmk_1)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIB50_0000037 (tmk_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvr03019
]
CIB50_0000037 (tmk_1)
Enzymes [BR:
kvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.34 GDP-polyphosphate phosphotransferase
CIB50_0000037 (tmk_1)
Messenger RNA biogenesis [BR:
kvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CIB50_0000037 (tmk_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PPK2
PSK_trans_fac
Motif
Other DBs
NCBI-ProteinID:
QMS55357
UniProt:
A0A7D7Q1S0
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All DBs
Position
complement(48053..49090)
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AA seq
345 aa
AA seq
DB search
MSKQPDQKQSTAHAGKAKDESTGAGTRSAVNDALKKEQHRVSVVEDYAAELDEIAELGKK
LHDDRGIESSSAWKIGYPYDEKLSRKEYERTKRALQIELLKLQLWIKETGQKLLIIFEGR
DAAGKGGSIKRFTEHLNPRGARVVALEKPTEIEQTQWYFQRYVKHLPSGGEIVLMDRSWY
NRAGVERVMGYCTSQQYYEFMRQAPEFERMLVNSDTHLIKFWFSVTRAEQLARFQSRRTD
PVRQWKLSPTDVASLDKWDDYTEAKEAMFFYTDTGDAPWTVIKSNDKKRARLEAMRYVLA
QFDYPNKDHALVGAVDTNIVGGATDLADDNGVNPDGFPVVRPGKD
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagcaaccggaccagaagcagagcaccgcgcacgccgggaaggcgaaggacgag
agcaccggggcgggcacgcgctccgccgtgaacgacgctctgaagaaggagcagcaccgg
gtctccgtggtcgaggactacgcggcggagctggacgagatcgcagagctcgggaagaag
ctgcacgacgaccgcggcatcgagagttcctcggcctggaagatcggctatccgtacgac
gagaagctctcccgcaaggagtacgagcgcaccaaacgggccctgcaaatcgagctgctg
aagctgcagctgtggatcaaggagaccggccagaagctgttgatcatcttcgagggccgg
gacgccgcgggcaagggcgggtcgatcaagcgctttaccgagcacctgaacccccgtggc
gcgcgtgtggtggcgctcgagaagcctacggagatcgagcagacccagtggtacttccag
cgctacgtgaagcacctgccctccggcggggagatcgtgctgatggaccgttcctggtac
aacagagccggtgtggagcgggtaatgggctactgcacgtcccagcagtactacgagttc
atgcgccaggccccggagttcgagcggatgctggtcaactcggacacccacttgatcaag
ttctggttctcggtgacccgcgccgagcagctggcacgattccagtcgcgccgcacggac
cccgtgcgccagtggaagctctcgcccacggacgtggcctcgctggacaagtgggacgac
tacaccgaggccaaggaggccatgttcttctacacggacacgggggacgccccctggacc
gtgatcaagtcgaacgacaagaagcgggcgaggctcgaggccatgcgctacgtcctcgca
cagttcgactaccccaacaaagaccatgctctcgtgggcgcggtggacaccaacatcgtg
ggcggggccacggacctcgctgacgacaacggcgtcaaccccgacggcttcccggtggtc
cgccccgggaaggactga
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