Kocuria varians: CIB50_0000082
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Entry
CIB50_0000082 CDS
T06882
Symbol
pcaB
Name
(GenBank) 3-carboxy-cis,cis-muconate cycloisomerase
KO
K01857
3-carboxy-cis,cis-muconate cycloisomerase [EC:
5.5.1.2
]
Organism
kvr
Kocuria varians
Pathway
kvr00362
Benzoate degradation
kvr01100
Metabolic pathways
kvr01120
Microbial metabolism in diverse environments
kvr01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
CIB50_0000082 (pcaB)
Enzymes [BR:
kvr01000
]
5. Isomerases
5.5 Intramolecular lyases
5.5.1 Intramolecular lyases (only sub-subclass identified to date)
5.5.1.2 3-carboxy-cis,cis-muconate cycloisomerase
CIB50_0000082 (pcaB)
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Gene cluster
GFIT
Motif
Pfam:
Lyase_1
Motif
Other DBs
NCBI-ProteinID:
QMS55402
UniProt:
A0A7D7Q369
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All DBs
Position
complement(80739..82178)
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AA seq
479 aa
AA seq
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MIEAGLLLPGAHRAAALADDRAVARAILRVEDAWVTAQSRTGLVPAAAAEAAHAAVDRVP
LDEASLTELAVASEGGGNPVIPLLAAYRRVVEEEHGRPLGAVHAGLTSQDVMDTTLALVV
EDVRGTVLDGLDRTGDALAGLAVRHRDTVMVGRTLTQHALPVSFGLKAASWLAGVDDAAD
DVAARAHLPVSFGGAAGTLAATVARCTHPGDSGQRAWQRVRELLGHWAEELGLELPDGVW
HTNRVPVLRAAGSLAETTAALSRMANDVLTMSRPEVGELREPAAEGRGVSSAMPQKQNPV
LSVLLKRTGIAAPALLAQVVAGASAADDERPDGGWHAEWPALRELAVLTAAASSHAAELA
EGLTVGEERMTRNLADAGTGVMAERLNTALAPVLGERDGRSAKQRIQAAVRAEPQDPDAL
AAALAAEVRTGEDVELPEGVAASELTGWIRGLLDPRGYLGAAPQLCERAAARHDERKRR
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgaggcgggtctgctgctgcccggagcgcaccgggccgcggccctggccgacgac
cgtgccgtggcccgcgcgatcctccgggtggaggacgcgtgggtcaccgcccagtcccgg
acggggctcgtgcccgccgctgccgccgaggccgcgcacgccgcggtggaccgggtgccg
ctcgacgaggcgtcactcaccgagctggcggtcgcctccgagggagggggcaaccccgtg
atcccgctgctggcggcctaccgccgggtggtcgaggaggagcacggccgtcccctgggc
gcagtgcacgccggtctgacgagccaggacgtgatggacacgaccctggccctcgtggtc
gaggacgtgcgcggcaccgtgttggacgggcttgaccgcaccggggacgcgctcgcgggc
ctcgcggtgcgtcaccgggacacggtcatggtcgggcgcaccctgacccagcacgccctg
ccggtctccttcggtctcaaggcggcgtcctggctcgcgggcgtggacgacgccgcggac
gacgtcgccgcgcgcgcccacctgcccgtctccttcggcggggcggccgggacgctcgcg
gccaccgtggcacgctgcacccaccccggggactccgggcaacgggcgtggcagcgggtc
cgggagctgctcgggcactgggcggaggagcttggactcgagctgcccgacggcgtgtgg
cacaccaaccgggtgccggtgctgcgggccgcggggagcctcgcggagaccacggcggcg
ctgtcccggatggcgaacgacgtcctgacgatgtcgcggcccgaggtcggcgagctccgg
gaaccggccgccgagggccgaggcgtgtcctcggccatgccgcagaagcagaaccccgtg
ctgagcgtgctcctcaagcgcacgggcatcgcggcgccggccctgctggcccaggtggtg
gcaggcgcgagtgccgcggacgacgagcggccggacggcggctggcacgccgagtggcca
gcgctgcgcgagctcgcggtgctgacggccgcggcgtcgtcgcacgcggccgaactggcc
gaggggctcaccgtcggcgaggagcgcatgacccgcaacctggcggacgccgggacgggc
gtgatggccgaacggctgaacaccgcgctggcccccgtgctgggggagcgggacgggcgc
agtgcgaagcagcgcatccaggctgccgtgcgcgccgagccgcaggatccggacgcgctc
gccgccgcgctcgcggctgaggtgcggacgggtgaggacgtggagctgcccgagggggtg
gccgcctccgagctcaccggctggatccgcggcctgctggacccgcgaggatacctgggt
gcggccccgcagctgtgcgagcgcgccgccgcccgacacgacgagaggaagagacgatga
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