Kocuria varians: CIB50_0000674
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Entry
CIB50_0000674 CDS
T06882
Symbol
lysX
Name
(GenBank) Lysylphosphatidylglycerol biosynthesis bifunctional protein LysX
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
kvr
Kocuria varians
Pathway
kvr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CIB50_0000674 (lysX)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kvr01007
]
CIB50_0000674 (lysX)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvr03016
]
CIB50_0000674 (lysX)
Enzymes [BR:
kvr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
CIB50_0000674 (lysX)
Amino acid related enzymes [BR:
kvr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CIB50_0000674 (lysX)
Transfer RNA biogenesis [BR:
kvr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
CIB50_0000674 (lysX)
Prokaryotic type
Other AARSs
CIB50_0000674 (lysX)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LPG_synthase_C
tRNA-synt_2
tRNA-synt_2_TM
tRNA_anti-codon
tRNA-synt_2d
TM140
Motif
Other DBs
NCBI-ProteinID:
QMS55976
UniProt:
A0A7D7PY42
LinkDB
All DBs
Position
complement(747564..750905)
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AA seq
1113 aa
AA seq
DB search
MGNTQVVRGRRTRDVRTATARQERWARILIWIFALATAAGVVLLLLHWVTRVNPLPSILF
GTLNLPVAPSLVSVVVLGLLTGALVRRKRIALVLVGTTQVVGVTWSVLMLVLRAVVPDLP
HHGPFPVWVSPMLDAVAVAVGIAALGLLWWLRPAFPARTESRGALAALAMLVGGVVLTVA
ATHALLLATTSSAIDDWNVLGEALVRSLGWAGPRRRYLSTVPPWLPELTSALLALTIVLA
VLIFLRSSSSSRSAAWRPEDEVAVRSLLREFGGEDSLGYFATRRDKSAVFSADGRACVTF
RVVGQVSIASGDPVGDPAVWPDAIRRWLDRAHHYGLLPAVTSASERAARAYAEAGLSVLV
MGDEAVLHPDRYSLANSSMTPVRRAVRRARRAGLVTEIARHQDFPPEELTRLGVLADQWR
GDEPDRGFSMALNRWGDPADGQCLLVVARDEHGAEQGLLSFVPWGRGGLSLDVMRRAPHT
PNGVTELMVTDLMEHCASHGIRRVSLNFAMFRGVFEDSEKLGAGVITRFNSSVLGYMDRF
FQLESLYRSNAKYLPEWVPRYACFDGVLALPRMAVATAQVEGFLPAVFVRTPPQPELDAG
TLEQILEIQHEPAPMRVLAPRRSQQTRHRMRHARALARDGVNPYPVGLAPAETVAHTQAA
RLRGDAASSSEVRTSGRVRRFRDFGGVGFVDLTDGGVTVQVLVDRARVDSTWSTIRRNLD
VGDLLVVDGRWGNSRTGTESILARRVTVAAKALQPVPYSGFENPEQRLRRRSLDLLVHPH
GMDLLRQRSQAVDTVRRLLQEEGYREVETPVLNTVHGGASARPFRTFINAYGMDLTLRIA
PELYLKRLLVAGSGPIFEVARNFRNEGADATHNPEFTALEAYHPYADYTVMRQLTERLVK
AVATALHGAPVLPLRDVHAPDAEPTPTDVSGPWPVVTVTDAVSRAVGREISIRTDFEVLL
QAAAAHDVEIGPGMGPGAVLEALYEELVEPLTVFPTFYCDFPEETSPLTAPHRSEPGLVE
RWDLVVNGMELGTAYSELTDPVVQRHRLTEQSLKATAGDPEAMEVDDDFLDALEVGMPPA
GGLGIGLDRLVMLMTATSIREVLGFPFVKPQKN
NT seq
3342 nt
NT seq
+upstream
nt +downstream
nt
atgggtaacacccaggtggtacgcggcaggcgcacacgggacgtcaggaccgccacggcc
cggcaggagcgctgggcacgaatccttatctggatcttcgcgctggccacggcggcgggt
gtggtgctgctgctgctgcactgggtcacccgggtcaacccgctgccgagcatcctcttc
ggaaccctcaacctccccgtggcgccgtccctggtctccgtggtggtgctcgggctgctg
acgggcgcgctcgtgcggcgcaagcggatcgccctggtactggtgggcaccacccaggtg
gtgggtgtcacctggtcggtgctcatgctggtgctgcgcgccgtggtcccggacctgccg
caccacggccccttcccggtgtgggtcagtcccatgctcgacgcggtcgccgtggctgtg
ggcatcgccgcactgggcctgctgtggtggctgcgccccgcgttccctgcccgcaccgag
tcccggggtgcactcgccgcgctggcgatgctggtgggcggcgtggtcctcacggtcgcg
gccacgcacgcgctgctgctcgcgaccaccagctcggccatcgacgactggaacgtcctg
ggggaggcgctcgtgcgcagcctcgggtgggcgggcccgcgacgtcgctacctcagcacc
gtgccgccctggctccccgagctcacctcggccctgctggccctgaccatcgtgcttgcc
gtgctgatcttcctgcgctccagctccagctcccgctcggccgcgtggcggcccgaggac
gaggtggcggtgcgctcgctgctgcgcgagttcgggggtgaggactccctggggtacttc
gccacgcggcgggacaagtccgcagtgttctccgcggacggccgggcctgcgtgacgttc
cgggtagtcgggcaggtctcgatcgcctccggagacccggtgggcgatcccgcggtgtgg
ccggacgccatccggcgttggctcgaccgtgcccaccactacggtctgctgcccgcggtc
acctccgcctcggaacgtgcggcacgggcatatgcggaagcgggcctcagcgtgctcgtc
atgggggacgaggccgtcctgcacccggaccgctactccctggccaactcgtccatgacg
ccggtgcgccgggccgttcggcgagcgcgccgtgccgggctggtcacggagatcgcccgc
caccaggacttcccgccggaggagctgacgcggctgggtgtgctcgcggaccagtggcgt
ggcgatgagccggaccgcgggttctccatggccctgaacaggtggggggatccggctgac
gggcagtgcctgctggtggtggcccgggacgagcacggggcagagcaggggctgctctcc
ttcgtgccgtggggccgcggcgggctgtccctggacgtgatgcgccgggcaccgcacacc
ccgaacggcgtcaccgagctgatggtcacggacctgatggagcactgcgcatcgcacggg
atcagacgggtctccctgaacttcgcgatgttccgcggggtcttcgaggactccgagaaa
ctgggtgcgggcgtgatcacccggttcaactcctcggtgctgggctacatggaccgcttc
ttccagctggagagcctctaccgctccaacgccaagtacctgcccgagtgggtaccgcgc
tacgcgtgcttcgacggtgtcctggccctgccccgcatggccgtggcgaccgcccaggtg
gagggcttcctgcccgcggtgttcgtgcgcacgcccccgcagccggagctcgacgcgggg
acgctcgagcagatcctggagatccagcacgagccggcgcccatgcgggtgctcgcgccc
cggcgctcgcagcagacgcgccaccgcatgcgccacgcccgtgccctggcccgcgacggg
gtcaacccgtaccccgtggggctggcccctgcggagaccgtcgcgcacacgcaggccgcg
cgcctgcgaggcgacgcggcgtcgtcgtcggaggtgcggaccagcgggcgggtgcggcgg
ttccgcgacttcggcggcgtgggcttcgtggacctcaccgacggcggcgtgaccgtccag
gtgctcgtggaccgcgcacgcgtggactccacgtggtccacgatccggcgcaacctggac
gtgggggacctcctggtggtggacggtcggtgggggaactctcgcacggggacggagtcc
attctcgcgcggcgcgtgaccgtggcggcgaaggccctgcaaccggtgccctacagcggt
ttcgagaaccccgagcagcggctgcgcagacgctccctggacctgctggtgcacccgcac
gggatggacctgctgcggcagcgctcgcaggccgtggacaccgtccgccggctgctgcag
gaggaggggtaccgggaggtcgagacgcccgtgctgaacaccgtgcacggcggcgcctcc
gcccggccgttccgcacgttcatcaacgcgtacggcatggacctcacactgcggatcgcc
ccggagctgtacctgaagcggctgctcgtggcgggaagcgggccgatcttcgaggtggcc
cgcaacttccgcaacgagggcgcggacgccacccacaaccccgagttcacggcgctggag
gcgtaccacccgtacgcggactacacggtcatgcggcagctgaccgagcgcctggtcaag
gccgtggccacggcactgcacggtgcgcccgtactgccgctgcgggacgtccacgccccg
gacgccgagcccacccccacggacgtctccgggccgtggcccgtggtcaccgtgacggac
gccgtgagccgggccgtggggcgcgagatctcgatccgaacggacttcgaggtgctgctg
caggcggcggcggcgcatgacgtggagatcggcccgggcatgggtcccggcgccgtgctc
gaggccctctacgaggagctcgtggagccgctcacggtgttccccacgttctactgcgac
ttccccgaggagacctcgccgctgaccgcgccgcaccgcagcgagccggggctcgtggag
cgctgggacctggtggtcaacgggatggagctgggcaccgcgtactcggagctgaccgac
cccgtggtgcagcgccaccggctcacggagcagtccctcaaggccacggcgggggatccg
gaggccatggaggtggacgacgacttcctggacgccctcgaggtgggcatgccacccgcc
ggcgggctggggatcggactagaccggctggtcatgctcatgacggccacctccatccgg
gaggtgctggggttcccgttcgtgaagccgcagaagaactga
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