Kocuria varians: CIB50_0000685
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Entry
CIB50_0000685 CDS
T06882
Symbol
gyrA_1
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kvr03032
]
CIB50_0000685 (gyrA_1)
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0000685 (gyrA_1)
Enzymes [BR:
kvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CIB50_0000685 (gyrA_1)
DNA replication proteins [BR:
kvr03032
]
Prokaryotic type
DNA Topoisomerases
CIB50_0000685 (gyrA_1)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CIB50_0000685 (gyrA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
IFT20
Motif
Other DBs
NCBI-ProteinID:
QMS55985
UniProt:
A0A7D7KY03
LinkDB
All DBs
Position
complement(760284..763055)
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AA seq
923 aa
AA seq
DB search
MSDETQDGNGPVEPENTPEVITEVGTGEVETAGDRVEQIDLQTEMQRSYLDYAMAVIVGR
ALPDVRDGLKPVHRRVIYTMYDGGYRPERSFNKCARVVGDVMGNYHPHGDSAIYDALVRL
IQGWIMRYPLALGQGNFGSPGNDGAAAPRYTETKMAPLAMEMVRDIHEDTVDFQDNYDGK
QQEPTVLPARFPNLLVNGSSGIAVGMATNIPPHNLREVADGVQWYLQNPDVDRETLLEEL
IRRVKGPDFPSGAQILGHKGIEQAYRTGRGSITQRAVVSVEELNNRTCLVVTELPYQVNP
DNLAIKIADLVKDGKVQGIADMRDETSGRTGQRLVIVLKRDAVPKVVLNNLYKHTQLQEN
FSANMLALVDGVPRTLSLDAFVFHWVAHQMEVIVRRTRFRLKQAQEEAHILLGLLKALDA
LDEVIALIRRSPTVEEARSGLMELLGIDEAQAQAILNMQLRRLAALERQKIQDRHAELQR
LIDEYEAIIASEDRQREIISEELGEIVERYGDDRRTEVLYGFDGDVSMEDLIPQQQVVVT
ITRDGYVKRTRADEYRAQHRGGRGIKGAQLRGDDVVEHFFVTNTHNWILFFTTLGRVYRV
KAYEFVEAGRDAKGQHVANLMEFQPDERIAKVMELHSYQDAPYLVLATRSGLVKKSRLTD
YDTNRSAGVIAINLREGDELVSAMLVNTDDDIMLISRHGQSLRFTADDDALRPMGRATSG
VTGMKFRSGDELLSANVVTDDSHVFVVTEGGYAKRTEVQEYRVQGRGGLGIKVAKLAEVR
GGLVGGLIVGENDEVLVVMESGKVVRSNVSEVPSRGRDTMGVIFAKPGANDTIVGVARNA
EREIEKEVAEEGVEEAGHEDVAAATAVDPFARTESTVEKDAIRGGEGEAVSEEVDVVIVE
DAGDPADDADAVALEDNDNGGDA
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacgagacgcaggacggcaacggtcccgtggagccggagaacacccccgaggtc
atcacggaggtcgggaccggggaggtcgagaccgctggagaccgagtggagcagatcgac
ctgcagacggagatgcagcgctcctacctggactacgcgatggccgtgatcgtgggccgg
gcgctgccggacgtgcgggatggcctcaagccggtgcaccgccgcgtgatctacacgatg
tacgacggcggctaccgcccggagcgctcgttcaacaagtgcgcgcgcgtcgtcggcgac
gtcatgggcaactaccacccccacggcgactccgcgatctacgacgccctggtgcgcctg
atccagggctggatcatgcgctacccgctcgcgctggggcagggcaacttcggctccccg
ggcaacgacggcgccgcagcaccgcggtacaccgagaccaagatggcgccgctggccatg
gagatggtccgggacatccacgaggacaccgtggacttccaggacaactacgacggcaag
cagcaggagcccaccgtgctgccggcgcgcttccccaacctgctggtcaacggctcctcg
ggtatcgcggtgggcatggccaccaacatccccccgcacaacctgcgggaggtcgcggac
ggcgtccagtggtacctgcagaacccggacgtggaccgcgagaccctgctggaggagctc
atcaggcgcgtcaagggcccggacttcccgtccggtgcccagatcctcgggcacaagggc
atcgagcaggcgtaccgcaccggccgcggctcgatcacccagcgcgcggtggtcagcgtg
gaggagctcaacaaccgcacctgcctggtggtcacggagctgccgtaccaggtcaacccg
gacaacctggcgatcaagatcgccgacctcgtcaaggacggcaaggtccagggcatcgcg
gacatgcgggacgagacttcggggcgcaccggtcagcgcctggtgatcgtgctcaagcgg
gacgccgtgcccaaggtggtgctcaacaacctctacaagcacacgcagctgcaggagaac
ttctccgcgaacatgctcgcgctcgtggacggggtgccacgcacgctgtccctggacgcc
ttcgtgttccactgggtggcccatcagatggaagtcatcgtgcggcgcacccggttccgc
ctcaagcaggcgcaggaggaggcgcacatcctgctgggcctgctcaaggccctggacgcc
ctggacgaggtgatcgccctgatccgccgctcgcccaccgtggaggaggcgcgctccggg
ctgatggagctgctcggcatcgacgaggctcaggcccaggcgatcctgaacatgcagttg
cgccgactggccgccctggagcgtcagaagatccaggaccgccacgcggagctgcagcgg
ctgattgacgagtacgaggcgatcattgcgtccgaggatcgtcagcgcgagatcatctcc
gaggagctcggggagatcgtggagcgctacggggacgaccgccgcacggaggtgctctac
ggcttcgacggggacgtctccatggaggacctcattccgcagcagcaggtggtggtcacc
atcacccgcgacggctacgtcaagcgcacccgcgcggacgagtaccgcgcgcagcaccgc
ggcggccggggcatcaagggtgcccagctgcgcggtgacgacgtcgtggagcacttcttc
gtgacgaacacccacaactggatcctgttcttcaccaccctggggcgggtataccgggtc
aaggcgtacgagttcgtggaggccgggcgtgacgccaagggccagcacgtggcgaacctc
atggagttccagccggacgagcgcattgccaaggtcatggagctgcactcctaccaggac
gccccgtacctggtgctcgccacccgcagcgggctggtcaagaagtcccgtctcacggac
tacgacaccaaccgttccgccggcgtgatcgccatcaacctgcgcgagggcgacgagctg
gtctcggccatgctcgtgaacacggacgacgacatcatgctgatctcgcgccacggccag
tccttgcgcttcacggccgacgacgacgccctgcgccccatgggccgcgcgacgtccggt
gtgacgggcatgaagttccgttccggcgacgagctgctctcggccaacgtggtcacggac
gactcgcacgtgttcgtggtgaccgagggcggctacgccaagcgcaccgaggtgcaggag
taccgcgtccagggccgcggcggcctgggcatcaaggtggccaagctcgccgaggtccgt
ggtggcctggtgggcggtctgatcgtgggcgagaacgacgaggtgctcgtggtcatggag
agcggcaaggtggtgcgctccaacgtcagcgaggtgccgtcccggggccgcgacaccatg
ggggtgatcttcgcgaagcccggtgccaacgacaccatcgtgggtgtggcccgcaacgcg
gagcgcgagatcgagaaggaagtggccgaggagggcgtcgaggaggccgggcacgaggac
gtcgcggccgccacggcggtcgatccgttcgcgcgcaccgagtccacggtcgagaaggat
gcgatccggggcggcgagggagaggccgtctccgaggaggtcgacgtcgtgatcgtcgag
gacgctggtgacccggcggacgatgcggatgcagtagcgttggaggacaacgacaacgga
ggtgacgcatga
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