Kocuria varians: CIB50_0001176
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Entry
CIB50_0001176 CDS
T06882
Symbol
radA
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001176 (radA)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CIB50_0001176 (radA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
DnaB_C
AAA_22
AAA
Lon_C
AAA_29
AAA_16
ABC_tran
DUF7125
NTPase_1
Ribosomal_L44
AAA_19
NACHT
AAA_24
RsgA_GTPase
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
QMS56471
UniProt:
A0A7D7KZG4
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All DBs
Position
complement(1309636..1311153)
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AA seq
505 aa
AA seq
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MRVGAAPYGEAMSTKTRKPSVTYRCTECGWTTAKWVGRCGECQAWGTVQEMGGSQEHGRT
RAASSVATPARPISQVDSSVARFTPTQVPELDRVLGGGLVPGAVILLAGEPGVGKSTLLL
DAAAKVAAGAAGEAMRTAGPNASTGEGAERASGSRATSSGASPRTVLYVTGEESAAQVKL
RAERINALSDTLYLAAESDLSAALAQVEALSPDLLVVDSVQTLASSEIEGSAGGVSQVRE
VAASLIHAAKTRNMTTLLVGHVTKEGSIAGPRLLEHLVDVVCQFEGDKHSRIRLLRAVKN
RFGPTDEVGCFDLEENGIRSVSDPSGLFVSRTPVPVAGTCLSVTVEGRRPLLAEVQALLD
KSSTAQPRRATAGLDGSRVAMLLAVLQRRAGVALASMDCYVSTVGGVRLTEPATDLAVCM
ALASAAQDRPLPQRLVCFGEIGLAGEVRPVPEINRRIQEVARLGFTHAVVPASPSGPGKI
PPGFSVREVTTVNQAMELLFPPRAG
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgtcggagccgccccctatggtgaggccatgagcacgaagacccgtaagccctcc
gtgacctaccgctgcacggagtgtgggtggaccaccgccaagtgggtggggcgctgcggt
gagtgccaggcctggggaaccgtccaggagatgggcggcagccaggagcacggtcgcacc
cgagcggcgtcctccgtggccactccggcacggcccatctcccaggtggactcctccgtc
gcgcggttcacccccacccaggttcccgagctggacagggtgctcgggggcgggctcgtc
ccgggcgccgtgatcctgctcgccggtgaacccggcgtgggcaagtccaccctgctgctg
gacgccgccgcgaaggttgccgcgggcgccgcgggtgaggcgatgcgcaccgcggggccg
aacgccagtaccggcgagggcgcggaacgcgcgtccggttcgcgggcaacgtcgtccggg
gcctcccctcgcaccgtgctctacgtgaccggggaggagtccgccgcgcaggtgaagctg
agagccgagcggatcaacgcactctcagacacgctgtacctggcggcggagtcggacctc
tcggcggcactggcgcaagtcgaggcgctgtccccggacctgctggtcgtggactccgtg
cagacgttggcgagctcggagatcgagggctccgccggcggtgtgagccaggtgcgggag
gtggccgcgagcctcatccacgccgcgaagaccaggaacatgaccaccctgctcgtgggc
cacgtgaccaaggagggctcgatcgccgggccccggctgctcgagcacctcgtggacgtg
gtgtgccagttcgagggtgacaagcactcgcgcatccggctgctgcgggccgtcaagaac
cgcttcgggcccacggacgaggtggggtgcttcgacctcgaggagaacggcatccgctcc
gtctcggacccctcgggactgttcgtctcccgcacccccgtgccggtggcgggcacgtgc
ctgagcgtcacggtggagggccgccgacccctgctcgccgaggtccaggcgctgctggac
aagtcgagcaccgcgcagccgcggcgggccaccgccgggctggacggctcccgcgtagcc
atgctgctggccgtgctgcagcgcagggccggcgtggccctcgcctccatggactgctac
gtctccacggtgggcggggtgcggctgacggagcccgccacggacctggccgtgtgcatg
gccctggcctccgccgcgcaggaccgcccgctgccgcagcggctcgtgtgcttcggggag
atcgggctggccggggaggtgcggccggtgccggagatcaaccgtcggatccaggaggtc
gcccgcctgggattcacccacgcggtcgtccccgcctcgcccagcggcccggggaagatc
ccgccggggttctcggtgcgggaggtcaccacggtgaaccaggctatggagctgctcttc
ccgccgcgggccggctga
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