Kocuria varians: CIB50_0001220
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Entry
CIB50_0001220 CDS
T06882
Symbol
ispF
Name
(GenBank) 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
KO
K01770
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [EC:
4.6.1.12
]
Organism
kvr
Kocuria varians
Pathway
kvr00900
Terpenoid backbone biosynthesis
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
CIB50_0001220 (ispF)
Enzymes [BR:
kvr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.12 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
CIB50_0001220 (ispF)
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GFIT
Motif
Pfam:
YgbB
Motif
Other DBs
NCBI-ProteinID:
QMS56511
UniProt:
A0A7D7KZI3
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All DBs
Position
1362289..1362789
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AA seq
166 aa
AA seq
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MSTLSPLPYPLPLTGIGVDVHAFGPEGTPLWIAGLLWPGERGLSGHSDGDVVAHAAADAL
FSAAGVGDLGAHFGTDRPEMAGASGVAILSEAVRTVTTAGFRVGNVSVQLIGNRPRFAPR
REEAAAVLTEAAGAPVHLSATTTDALGLTGRGEGIAAIATALVLPA
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccttgagcccccttccgtacccccttcccctgaccggcatcggcgtggacgtc
cacgcgttcggcccggaggggacccccctgtggatcgcagggctcctgtggcccggcgag
cgcggtctgagcgggcactcggacggggacgtcgtggcgcacgcggccgcggacgctctg
ttctctgcagccggggtgggggacctcggcgcccacttcggcacggaccgtccggagatg
gcgggggcctccggcgtcgcgatcctctccgaggccgtgcgcaccgtgaccacggccggc
ttccgggtgggcaacgtgtccgtgcagctgatcggcaaccggcccaggttcgcaccccgg
cgcgaggaggccgccgccgtgctcacggaggcggccggtgctcctgtgcacctgagcgcc
accaccacggacgccctcggcctcacgggccgcggggagggtatcgcggcgatcgccacg
gccctcgtgctgccggcctga
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