Kocuria varians: CIB50_0001227
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Entry
CIB50_0001227 CDS
T06882
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching enzyme GlgB
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
kvr
Kocuria varians
Pathway
kvr00500
Starch and sucrose metabolism
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
CIB50_0001227 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kvr04147
]
CIB50_0001227 (glgB)
Enzymes [BR:
kvr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
CIB50_0001227 (glgB)
Exosome [BR:
kvr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
CIB50_0001227 (glgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_48
GlgB_N
Alpha-amylase_C
Alpha-amylase
Mak_N_cap
DUF4042
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
QMS56518
UniProt:
A0A7D7Q3R6
LinkDB
All DBs
Position
1374771..1378922
Genome browser
AA seq
1383 aa
AA seq
DB search
MTDQQLLDRLREWLPLQRWFPFTATPDQLRLNVVGRTDVGGDDRWESEPGTQRTIYLVQV
TVGERTELLSVPVVGSIREIPELERFAIGSYCVGGPDRPLPEQLIAGAEASASFLRRAIS
QAGSLLERRRGSRHGTQGGARRAADDAASSGSARPGTEAADRVSGTEAADDGATLHLYDA
VGEPGFLDRVLRMMDAQLTEGGVLRHGMGLHGRYTGALNTDYRISSPEQVHVISSEQSNT
SVILRPAQTADRTDALGGDAVIVKFFRVVGEGRNPDVEVGVKLTSHGSTAVPATAGWLDA
QWRQGLVTTSGQLAVAAQFLDHSEDAWAMAVSAATQGSDFTDLARDLGATTARVHADLLG
AFEPVTVDDAARRRFLEDLASRIRWAWESCGERFESLTPQVDALLEELSETRSIPALQRI
HGDYHLGQVLHSDYQGFRILDFEGEPLRPIKERVRPDVALRDVVGMLRSFDYAGAMAAKE
TEQDTEEWTRAVSDAFVAGYGTTRGDVLDTDSVLYRALWLDKALYEVVYEQRNRPDWVQV
PAAAVVRSLERARSRNVSHEAHESQSTPSRTEDFVTTEHPQNTGPAPSSEPAASSEPSPS
ADPRATEGTTARSDSDASSPARGARHATRPSGGDAAPAASGPAGGPVPVAQDVLAAVAEG
RYHDPHSVLGAHPNPDGSVTIRTLRRFATQVSVRTPNGTFPLEHEWGGIFTGVVPAHDEG
QIPDYRVDLTYAGKDQEEVDDPYRFAPTLGELDLHLIGEGRHETLWTVLGAHVQHYPSSL
GDVSGVSFAVWAPNAQAVRVIGDFNGWDGSEQAMRSLGSSGVWELFVPGMKSGDTYKFRI
CGVDGAWRDKADPMAFGTEIPPSTASRVFDSEYEFQDAEWMARRASTDPHNAPMSVYEMH
IGSWRMGLGYVDLARELVEYLTWQGFTHVEFMPVAEHPFGGSWGYQVTGYYAPSSRFGSP
DEFRYLVDQLHKAGIGVLVDWVPGHFPKDEWALAKFDGQPLYEHPDPRRGEHKDWGTLIF
DYGRREVRNFLVANANYWLEEFHVDGLRVDAVASMLYLDYSRNDGEWEPNQYGGRENLEA
IGFLQEANATAYRRNPGVVMIAEESTSFPGVTKPTSAGGLGFGIKWNMGWMHDSLEYMAE
DPINRHYHHNKATFSLVYAFSENFILPISHDEVVYGKGSLLRKMPGDRWQQLASVRAYLA
YMWAHPGKQLIFMGTEYAQESEWSQEHGLDWWLSETPPHHGVQELVKSLNEVYRSTPALY
SRDNDPSGFEWIDANDAMRNTLSFTRWDDQGNPLVSVANFAGNTHENFRLGLPWAGEWEE
VLNTDAEVFGGSGVGNLGKVTANEGAFNGAPASAELTVPPLAVLFLKPVSHAALEGGRQA
REE
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgacggatcagcaacttctcgaccggctgcgtgagtggctgccgctccagcggtggttc
ccgttcacggccaccccggaccagctgaggctgaacgtggtgggccgcacggacgtcggc
ggggacgaccgctgggagtccgagcccggcacgcagcgcaccatctacctggtgcaggtc
accgtgggcgagcgtacggagctgctcagcgtcccggtggtgggcagcatccgggagatt
ccggagctggagcggttcgcgatcggctcctactgcgtgggcggtccggaccgcccgctg
cccgagcagctgatcgcgggagcagaggcctcggcgtccttcctgcgccgcgcgatctcg
caggccggttcgctgctggagcgacgtcgcggctcgcgtcacgggacccagggtggggct
cgcagggcggcggacgacgccgcgtcgtcgggttccgcaaggccgggcactgaggctgcc
gaccgtgtgagtggtacggaggccgcggacgacggcgccacgctgcacctctacgatgcc
gtgggcgagcccggtttcctggaccgcgtgctgcggatgatggacgcgcagctcaccgag
ggaggggtgctgcgccacggcatgggtctgcacgggcgctacacgggcgcgctgaacacg
gactaccggatctcctccccggagcaggtgcacgtgatctcctcggagcagtccaacacg
tccgtgatcctgcgtcccgcgcagaccgcggaccggacggacgccctgggcggggacgcc
gtgatcgtcaagttcttccgcgtggtgggggagggccgcaacccggacgtcgaggtcggc
gtgaagctcacctcgcacggctccaccgcggtaccggccaccgcaggctggctcgacgct
cagtggcgccagggcctggtcaccacgtccgggcagctcgccgtggccgcgcagttcctg
gaccactccgaggacgcgtgggccatggcggtctccgccgccacgcagggcagcgacttc
acggacctcgcgcgggacctcggggccacgacggcgcgcgtgcacgccgacctcctgggt
gccttcgagcccgtcacggtcgacgacgccgcccggcgtcgtttcctggaggaccttgcc
tcgcgcatccgctgggcctgggagtcctgcggggaacgcttcgagtccctcacgccacag
gtcgacgcactgctcgaggagctctccgagacccggagcatcccggccctgcagcgcatc
cacggcgactaccacctggggcaggtgctgcacagcgactaccagggcttccgcatcctc
gacttcgaaggcgagccgctgcgtcctatcaaggagcgggtgcgcccggacgtggcgctg
cgcgacgtcgtgggaatgctgcgctccttcgactacgccggagccatggccgccaaggag
acggaacaggacaccgaggagtggacgcgcgcggtctccgacgcgttcgtggcgggctac
ggcaccacgcgcggggacgttctggacacggactccgtgctctaccgggcgctgtggctg
gacaaggccctctacgaggtcgtctacgagcagcgcaaccgacccgactgggtgcaggtc
cctgcggccgccgtggtgcgctcgcttgaacgtgcacgctcccgtaacgtgagtcacgaa
gcccacgagagccagtcaacgccgtcgagaaccgaggatttcgtgaccaccgagcacccc
cagaacaccggccccgcaccctcctccgagcctgccgcgtcctcagagccctcaccgtcc
gctgacccccgggccacggaggggacgaccgcccgttccgactccgacgcctccagcccc
gcgcgcggggcccgtcacgccacgcgtccctccggtggagatgccgcgccggcggcctcc
ggccccgccggcgggccggtgcctgtcgcccaggacgtcctcgcggcggtcgccgagggc
cgttaccacgatccccactccgtgctcggagcgcaccccaacccggacggctccgtgacc
atccgcacactgcggcgcttcgcgacgcaggtctcggtgcgcacgccgaacggcacgttc
cctctcgagcacgagtggggtggcatcttcaccggtgtggtcccggcgcacgacgagggc
cagatccccgactaccgcgtggacctgacgtacgcgggcaaggaccaggaagaggtcgac
gacccgtaccgcttcgcccccacgctcggcgagttggacctgcacctcatcggagagggc
cgccacgagacgctgtggacggttctgggcgcgcacgtgcagcactacccctcgtccctg
ggcgacgtctcgggtgtcagcttcgcggtgtgggcgcccaacgcccaggctgtgcgcgtg
atcggcgacttcaacggctgggacggctccgagcaggcgatgcgctcgctgggctccagc
ggcgtgtgggagctgttcgtgcccggcatgaagtccggggacacctacaagttccgcatc
tgcggggtggacggcgcgtggcgcgacaaggcggaccccatggcattcggcaccgagatc
ccgccgtccaccgcgtcgcgggtcttcgactccgagtacgagttccaggacgccgagtgg
atggctcggcgcgcgagtacggacccccacaacgcgcccatgagcgtgtacgagatgcac
atcggctcgtggcgcatgggactcggctacgtcgacctcgcgcgggagctcgtggagtac
ctcacgtggcaggggttcacgcacgtggagttcatgcccgtggccgagcacccgttcggc
ggctcctggggctaccaggtcaccggttactacgcgccgtcctcgcgcttcggctccccg
gacgagttccgctacctcgtggaccagctgcacaaggcgggcatcggcgtgctcgtggac
tgggtcccggggcacttccccaaagacgagtgggcgctcgccaagttcgacggccagccc
ctctacgagcacccggacccccgtcgcggcgagcacaaggactggggcacgctgatcttc
gactacggtcgtcgcgaagtgcgcaacttcctcgtggccaacgcgaactactggctcgag
gagtttcacgtggacgggctgcgcgtggacgctgtggcgtccatgctctacctcgactac
tcccgcaacgacggcgagtgggagcccaaccagtacggcggccgcgagaacctggaggcg
atcggcttcctgcaggaggccaacgcaacggcgtaccgccgcaaccccggcgtcgtgatg
attgcggaggagtccacatccttcccgggtgtcaccaagccaaccagcgcgggcggtctg
ggctttggcatcaagtggaacatgggatggatgcacgacagcctcgagtacatggccgag
gatccgatcaaccgccactaccaccacaacaaggccacgttctcactggtctatgcgttc
tcggagaacttcatcctgccgatctcgcacgacgaggtcgtctacgggaagggatcgctg
ctgcgcaagatgccgggcgaccgctggcagcagctggccagtgtgcgcgcctacctcgcg
tacatgtgggcacaccccggcaagcagctgatcttcatggggaccgagtacgcccaggaa
tccgagtggtcccaggagcacggtctggactggtggctctccgagactccgccgcaccac
ggcgtccaggaactggtgaagagcctgaacgaggtctaccgcagcacccccgcgctctac
tcgcgtgacaacgacccctcggggttcgagtggatcgacgcgaacgacgccatgcgcaac
accctctcgttcacccggtgggacgatcagggcaacccgctcgtgagcgtggcgaacttc
gccgggaacacccacgagaacttccgcctcggtctgccctgggccggcgagtgggaggag
gtgctgaacacggatgccgaggtcttcggcggttcgggcgtcggaaacctggggaaggtg
accgccaacgagggcgctttcaacggtgccccggcctcggcagagctcaccgttccccct
ttggccgtgctcttcctcaagccggtcagccacgccgcgctcgagggcggccgccaggct
cgagaggaatga
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