Kocuria varians: CIB50_0001254
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Entry
CIB50_0001254 CDS
T06882
Symbol
ung
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
kvr
Kocuria varians
Pathway
kvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIB50_0001254 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001254 (ung)
Enzymes [BR:
kvr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
CIB50_0001254 (ung)
DNA repair and recombination proteins [BR:
kvr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CIB50_0001254 (ung)
Prokaryotic type
CIB50_0001254 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
QMS56544
UniProt:
A0A7D7L2U1
LinkDB
All DBs
Position
complement(1418106..1418789)
Genome browser
AA seq
227 aa
AA seq
DB search
MNAQRPLHEIMHEEWARALQPVEGQIRAMGEFLRAEHAQGRHTLPAGENIFRAFREPLSA
VRVLIVGQDPYPTPGHAMGLSFSVAPDVRPVPRSLKNIYAELQSDLGIAPPPHGDLSSWS
GQGVMLLNRVLTVQAGAPASHRGKGWEAVTECAIRALGAREQPLVGILWGRDARGTAAWL
GGAPTVESAHPSPLSASRGFFGSRPFSRTSALLQEQGADSVSWELPG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcccagcgtccgctgcacgagatcatgcacgaggagtgggcgcgggccctgcaa
ccggtcgaggggcagatccgtgcgatgggcgagttcctgcgggccgagcacgcccagggc
cgccacactctgccggctggggagaacatcttccgtgcgttccgcgagccgctgtccgcc
gtcagggtgctgatcgtgggccaggacccgtaccccactcccggccacgcgatggggctc
tccttctcggtggcccctgacgtgcgccccgtgccccgttcgctcaagaacatctacgcg
gagctgcagtcggacctcgggatcgccccgccgccccacggggacctctcctcgtggtcc
gggcagggggtcatgctgctcaacagggtgctcaccgtccaggccggggcgccggcctcg
caccggggcaagggctgggaggcggtcacggagtgcgcgatccgagcgctgggcgcgcgc
gagcagcccctcgtgggaatcctgtggggccgcgacgcgcgcggcaccgcggcctggctg
ggcggcgcgcccaccgtggagtccgcgcacccctcgccgctctccgcgtcccgcggcttc
ttcggctcccgccccttctcccgcaccagcgccctgctgcaggagcagggcgcggactcc
gtctcctgggagctgccaggttag
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