Kocuria varians: CIB50_0001257
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Entry
CIB50_0001257 CDS
T06882
Symbol
groL1_2
Name
(GenBank) 60 kDa chaperonin 1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
kvr
Kocuria varians
Pathway
kvr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CIB50_0001257 (groL1_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvr03019
]
CIB50_0001257 (groL1_2)
03110 Chaperones and folding catalysts [BR:
kvr03110
]
CIB50_0001257 (groL1_2)
03029 Mitochondrial biogenesis [BR:
kvr03029
]
CIB50_0001257 (groL1_2)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kvr04147
]
CIB50_0001257 (groL1_2)
Enzymes [BR:
kvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
CIB50_0001257 (groL1_2)
Messenger RNA biogenesis [BR:
kvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CIB50_0001257 (groL1_2)
Chaperones and folding catalysts [BR:
kvr03110
]
Heat shock proteins
HSP60 / Chaperonin
CIB50_0001257 (groL1_2)
Mitochondrial biogenesis [BR:
kvr03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
CIB50_0001257 (groL1_2)
Exosome [BR:
kvr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
CIB50_0001257 (groL1_2)
Exosomal proteins of other body fluids (saliva and urine)
CIB50_0001257 (groL1_2)
Exosomal proteins of breast cancer cells
CIB50_0001257 (groL1_2)
Exosomal proteins of colorectal cancer cells
CIB50_0001257 (groL1_2)
Exosomal proteins of bladder cancer cells
CIB50_0001257 (groL1_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
CbiA
Motif
Other DBs
NCBI-ProteinID:
QMS56547
UniProt:
A0A7D7L013
LinkDB
All DBs
Position
1419744..1421378
Genome browser
AA seq
544 aa
AA seq
DB search
MAKMIAFDEEARRGLEKGLNTLADAVKVTLGPRGRNVVLEKSWGTPTITNDGVSIAKEIE
LEEPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPLSLKRGIE
KAVASVTEQLLSSAKEIETEEEIAATASISAADPEIGKLIAEAMEKVGKEGVITVEESNT
FGLDLELTEGMRFDKGYLSGYFVTDADRQEAVLEDPYILIVNSKISAVKDLVPVLEKVMQ
AGKPLLIIAEDVDGEALAMLVLNKMRGAVKSVAVKAPGFGDRRKAQLADIAILTGGQVIT
EEVGLSLESATIDLLGQARKVVVTKDETTIVDGAGTQEEIEGRVAQIRAEINNSDSDYDR
EKLQERLAKLAGGVAVLKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA
GAKVFESLDLSGDEATGANIVKVAIDAPLKQIALNAGLEPGVVVDKVRGLETGWGLNAAT
GEYEDLMAAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEPEAAGAGAGADPMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagatgatcgcattcgacgaagaagcacgccgcggtctggagaagggcctgaac
accctcgcggacgccgtgaaggtcacgctcggcccccgcgggcgcaacgtggtcctggag
aagtcctggggcacccccaccatcaccaacgacggtgtctccatcgccaaggagatcgag
ctcgaggagccgtacgagaagatcggcgccgagctcgtcaaggaggtcgccaagaagacc
gacgacgtcgccggtgacggcaccaccacggccaccgtgctcgcccaggccctcgtgaag
gaaggcctgcgcaacgtggccgccggtgcggacccgctgtccctgaagcgcggcatcgag
aaggccgtcgcgtcggtgaccgagcagctgctgtcctccgccaaggagatcgagaccgag
gaggagatcgccgccaccgcgtccatctccgcagccgatcccgagatcggcaagctcatc
gccgaggccatggagaaggtcggcaaggaaggcgtcatcaccgtcgaggagtccaacacc
ttcgggctggacctcgagctgaccgagggcatgcgcttcgacaagggctacctctccggc
tacttcgtcacggacgcggaccgccaggaggccgtcctcgaggatccctacatcctcatc
gtgaactccaagatctcggccgtgaaggacctcgtccccgtgctcgagaaggtcatgcag
gcgggcaagccgctgctgatcatcgccgaggacgtggacggcgaggcgctggccatgctc
gtgctcaacaagatgcgcggtgccgtgaagtccgtggccgtgaaggctcctggcttcggc
gaccgccgaaaggcgcagcttgcggacatcgcgatcctcaccggcggccaggtcatcacc
gaagaggtgggcctttcgctcgagtccgccacgatcgacctgctgggccaggcccgcaag
gtcgtcgtgaccaaggacgagaccaccatcgtggacggtgccggcacgcaggaggagatc
gagggccgcgtggcccagatccgcgcggagatcaacaactccgactccgactacgaccgc
gagaagctgcaggagcgcctggccaagctggccggtggcgtggctgtgctcaaggccggt
gcggccaccgaggtggagctcaaggagcgcaagcaccgcatcgaggacgccgtgcgcaac
gccaaggcagccgtggaggagggcatcgtcgccggtggcggcgtggccctcatccaggcc
ggtgccaaggtgttcgagtccctcgacctctccggtgacgaggccacgggcgcgaacatc
gtgaaggtcgccatcgacgcgccgctcaagcagatcgcgctgaacgccgggctggagccg
ggcgtggtggtcgacaaggtgcgcgggctcgagaccggctggggcctcaacgccgccacc
ggcgagtacgaggacctcatggccgcgggcatcaacgaccccgtcaaggtgacccgctcc
gccctgcagaacgcggcgtccatcgccgggctgttcctcaccacggaggccgtggtggcg
gacaagcccgagcccgaggccgccggtgcgggcgcgggtgccgatcccatgggtggcatg
ggcggcatgatgtga
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