Kocuria varians: CIB50_0001278
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Entry
CIB50_0001278 CDS
T06882
Symbol
sucC
Name
(GenBank) Succinate--CoA ligase [ADP-forming] subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
kvr
Kocuria varians
Pathway
kvr00020
Citrate cycle (TCA cycle)
kvr00640
Propanoate metabolism
kvr00660
C5-Branched dibasic acid metabolism
kvr00720
Other carbon fixation pathways
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
kvr01120
Microbial metabolism in diverse environments
kvr01200
Carbon metabolism
Module
kvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIB50_0001278 (sucC)
00640 Propanoate metabolism
CIB50_0001278 (sucC)
00660 C5-Branched dibasic acid metabolism
CIB50_0001278 (sucC)
09102 Energy metabolism
00720 Other carbon fixation pathways
CIB50_0001278 (sucC)
Enzymes [BR:
kvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
CIB50_0001278 (sucC)
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Paralog
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
CPSase_L_D2
Flavi_glycop_C
ATP-grasp
Ligase_CoA_2
Motif
Other DBs
NCBI-ProteinID:
QMS56566
UniProt:
A0A7D7KZE5
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All DBs
Position
1439692..1440861
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AA seq
389 aa
AA seq
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MDLFEYQARDLFEKHGVPVLAGIVATTPEEAKAAAEKIGGVTVVKAQVKVGGRGKAGGVK
VAKTADEAYEYAQQILGMDIKGHTVHRVMIAQGADIAEEYYFSVLLDRANRSYLAMCSVE
GGMEIEQLAVERPDALARVDVSPADGITEAKAREIVEQAKFDAETAEKVIPVLVKLGEVY
TKEDATLVEVNPLVKTGDGEILALDGKVSLDDNAEFRHPEHAELADKTTADPLEEKAKEN
DLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGEKHGNVKPANFLDIGGGASAAVMSAGLD
VILGDPQVKSVFVNVFGGITACDEVARGIVKALEILGDSATKPIVVRLDGNNVVEGRAIL
REANHPLVTNADTMDEGADKAAELAHSAK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtggacctgtttgagtaccaggcacgcgacctgttcgagaagcacggcgttcccgtgctg
gccggcatcgtcgccactaccccagaagaagccaaggcagctgccgagaagatcggcggc
gtgaccgtcgtcaaggcccaggtcaaagtcggcggccgcggcaaggccggcggcgtcaag
gtcgcgaagaccgcggatgaggcctacgagtacgcccagcagatcctgggcatggacatc
aagggccacaccgtccaccgcgtgatgatcgcgcagggcgcggacatcgccgaggagtac
tacttctccgtcctgctggaccgcgccaaccgctcctacctggccatgtgctcggtcgag
ggcggcatggagatcgagcagctcgccgtggagcgcccggacgccctggcccgcgtggac
gtcagccccgctgacggcatcaccgaggccaaggcgcgcgagatcgtggagcaggccaag
ttcgacgccgagaccgccgagaaggtcatcccggtgctcgtgaagctcggtgaggtctat
accaaggaggatgccaccctggtggaggtcaacccgctggtcaagaccggcgatggcgag
atcctcgccctggacggcaaagtctccctggacgacaacgccgagttccgccaccccgag
cacgccgagctcgcggacaagaccacggccgatcccctggaggagaaggccaaggagaac
gacctcaactacgtcaagctggacggcgaggtcgggatcatcggcaacggcgccggtctg
gtgatgtccaccctggacgtcgtggcgtacgcgggtgagaagcacggcaacgtgaagccc
gccaacttcctggacatcggaggcggggcctccgcggccgtcatgtccgccggcctggac
gtcatcctcggtgatccccaggtcaagtccgtgttcgtgaacgtcttcggcgggatcacc
gcgtgcgacgaggtcgcccgtggcatcgtcaaggctctggagatcctcggggactccgcc
accaagcccatcgtggtgcgactggacggcaacaacgtggtcgagggccgcgcgatcctg
cgcgaagccaaccacccgctggtcaccaacgcggacaccatggacgagggcgccgacaag
gccgccgagctcgcccactccgccaagtaa
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