Kocuria varians: CIB50_0001283
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Entry
CIB50_0001283 CDS
T06882
Symbol
rapA
Name
(GenBank) RNA polymerase-associated protein RapA
Organism
kvr
Kocuria varians
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SNF2_assoc
ResIII
DEAD
Motif
Other DBs
NCBI-ProteinID:
QMS56571
UniProt:
A0A7D7KZL4
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Position
complement(1446183..1449173)
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AA seq
996 aa
AA seq
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MVGAAQFPDAPLPGADPDWRSELSLIVPRSGGGRVVADPDSGPAAALELDLVRVQNRAPK
AWQKSPGEIPLTLSARPVVRGRRGWVRSGIDWSNLGSNARSGVLDDDQLDWFEELRTLAE
SHRGSYAADRYQLRLERYTSPLLWPLLARAEALGIPLVSRGTGAPVVLDPAGRFEVRVDP
GENGELRLHPQVVVGEKEIPLRWTRIIGHPGHGLFYPQATPEALDAAEDLNQFPLHLVAL
GTRLNQQQRSFLDRAETLTVPQEGVEEFFESYFPRLHQSMHVTAGEESLVLPQVADPEFV
LTLHHDDLTERVEWEWEYQKGRERVRLPFRPLDPLGDEAVARESGWESSMVQAVHRRIPD
LDFRRGSYAAEDALTLLRTWLPQLRRIPDLRIEETGGRPAYEEVNEPTQITVSTAPTEHH
DWFGLGVTVRVGEHYLPFSEIFQALDRGQDVMLLPDGSYFSLDRPEFIRLRELIAEARTL
QEDKGGPLSLNRYQSSLWEQFEELATDTEQAEQWRTGVRALAHLDEIPSPPVPPQLQATL
RPYQYEGFRWLSFLWDHDLGGILADDMGLGKTVQTIAAVLRAVERDPDLPPYLVVAPTSV
VANWSAELRRFAPSLSTTVLTSTKDSVTDAAAHSHVVLTSYALLRLDAEAYQDVDWAGVV
MDEAQFVKNPRTKAYRAVKNLRARTRLAITGTPMENSLSELWSLLSLTAAGLFPSRKQFT
EHYQRPIERAMDSDALARLRARLRPFMLRRTKADVDLQLPPKLEHVLPVGLNPEHRAAYD
RRLQRERAKILGLLRDFDRNRFTIFQSLTTLRMLALDPALVDPESTAASSKLDVLFEQLP
QLVQEGHRPLVFSQFTSFLKIVADRLDEAGIAYAYLDGSTRDRAGALETFRSGRAPVFLV
SLKAGGFGINLTEADYCYLLDPWWNPAAENQAVDRTHRIGQTKKVMVYRMVAENTIEEKV
MELKTRKADLFSAVLDDERVFSATLNADDIRSLVGV
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggttggtgctgcgcagttcccggacgcccctctgcccggtgcggatccggactggcgc
agcgagctgtccctcatcgtgccccgctccggcgggggcagggtcgtcgcggacccggac
tccggtcccgccgcggcgctcgagctcgacctcgtccgcgtgcagaaccgggccccgaag
gcgtggcagaaatcacccggggagatccctctgactctctccgcgaggcccgtggtgcgg
ggacgccgcggctgggtgcgctccgggatcgactggtcgaacctgggctccaacgcccgt
tccggcgtgctcgacgacgaccagctggactggttcgaggagctgaggacgctcgctgag
tcccaccgcggcagctacgccgcggaccgctaccagctgcgcctggagcgctacacctca
cccctgctgtggccgctgctcgcgcgcgccgaggccctcggcatcccgctggtctcccgg
ggcacgggtgcccccgtggtcctggaccccgcgggccgcttcgaggtccgcgtggacccg
ggcgagaacggggagctgcgcctgcacccgcaggtcgtggtgggcgagaaggagatcccc
ctgcgctggacgcggatcatcggccaccccggccacggcctcttctacccgcaggcgacc
cccgaggccctcgacgccgcggaggacctcaaccagttcccgttgcacctcgtggcgctc
ggcacgcgcctgaaccagcagcagcgctcgttcctggaccgcgccgagacgttgacggtg
ccgcaggaaggagtggaggagttcttcgagagctacttcccgcgcctgcaccagagcatg
cacgtgaccgccggggaggagtccctggtgctgccgcaggtcgcggaccccgagttcgta
ctcaccctccaccacgacgacctcaccgagcgtgtcgagtgggagtgggagtaccagaag
ggccgcgaacgggtgcggctgccgttcaggcccctggacccgctgggggacgaggctgtg
gcgcgggagtccggctgggagtcctccatggtccaggcggtgcaccgcaggatcccggac
ctcgacttccggcgtggctcctacgccgccgaggatgcactcacgctgctgcgcacctgg
ctcccccagttgcgcaggatcccggacctgcgtatcgaagagaccggcgggcgccccgcc
tacgaggaggtcaacgagcccacgcagatcacggtctccacggcgcccaccgagcaccac
gactggttcgggctgggagtgaccgtccgcgtgggcgagcattacctgccgttctccgag
atcttccaggccctggaccgcggccaggacgtcatgctgctgccggacggctcctacttc
tccctggaccgtcctgagttcatccgattgcgggagctgatcgccgaggcccggaccctg
caggaggacaagggtggacccctgagccttaaccggtaccagagcagcctgtgggagcag
ttcgaggagctggccacggacaccgagcaggccgagcagtggcgcaccggcgtgcgcgcc
ctcgcgcaccttgacgagatcccctctccgccggtgcccccgcagctgcaggccacgctg
cgcccgtaccagtacgaggggttccgctggctgagcttcctgtgggaccacgacctcggc
gggatcctcgcggacgacatgggcctcgggaagaccgtgcagaccatcgcggccgtcctg
cgcgccgtggagcgggacccggacctcccgccgtacctggtggtcgcccccacctccgtg
gtggccaactggtccgcagagctgcgccgcttcgccccctccctgagcaccacggtgctc
acgagcaccaaggactcggtgaccgacgccgcggcgcactcccacgtggtgctcacctcc
tacgcgctgctgcgcctggacgccgaggcctaccaggacgtggactgggccggagtggtc
atggacgaggcccagttcgtgaaaaatccgcggaccaaggcctaccgcgcggtcaagaac
ctgcgagcccgcacccgcctcgccatcacgggcacccccatggagaacagcctgtccgag
ctgtggtccctcctctccctcaccgctgcgggcctgttcccctcgcgcaagcagttcacg
gagcactaccagcggcccatcgagcgcgccatggactcagacgccctggccaggctgcgg
gcccggctgcgcccgttcatgctgcggcgcaccaaggcggacgtggacctgcagctgccc
cccaagctcgagcacgtgctgccggtgggtctgaacccggagcaccgtgccgcctacgac
cgcaggctgcagcgcgagcgcgccaagatcctggggctgctgcgggacttcgaccgcaac
aggttcaccatcttccagtcgctcaccacgctgcggatgctcgcgctggacccagcgctc
gtggaccccgagtccaccgcggcgtcctccaagctggacgtgctcttcgagcagcttccg
cagctcgtccaggaaggccaccggccactcgtgttcagccagttcaccagcttcctgaag
atcgtcgcggaccgtctggacgaggccgggatcgcatacgcctacctggacggcagcacc
cgggaccgtgcgggcgccctcgagacgttccgcagcggccgcgcccccgtgttcctcgtg
agcctcaaggccggcggcttcggcatcaacctcaccgaggcggactactgctacctcctg
gacccgtggtggaaccccgccgcggagaaccaggcggtggaccgcacccaccggatcggg
cagaccaagaaggtcatggtctaccggatggtcgcggagaacacgatcgaggagaaggtc
atggagctgaagacccgcaaggcagacctcttcagcgccgtgctcgacgacgagcgcgtg
ttctccgcaaccctgaacgcggacgacatccgctcgctcgtcggagtctga
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