Kocuria varians: CIB50_0001296
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Entry
CIB50_0001296 CDS
T06882
Symbol
glyA1
Name
(GenBank) Serine hydroxymethyltransferase 1
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
kvr
Kocuria varians
Pathway
kvr00260
Glycine, serine and threonine metabolism
kvr00460
Cyanoamino acid metabolism
kvr00630
Glyoxylate and dicarboxylate metabolism
kvr00670
One carbon pool by folate
kvr00680
Methane metabolism
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
kvr01120
Microbial metabolism in diverse environments
kvr01200
Carbon metabolism
kvr01230
Biosynthesis of amino acids
kvr01240
Biosynthesis of cofactors
kvr04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
CIB50_0001296 (glyA1)
09102 Energy metabolism
00680 Methane metabolism
CIB50_0001296 (glyA1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CIB50_0001296 (glyA1)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
CIB50_0001296 (glyA1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
CIB50_0001296 (glyA1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
CIB50_0001296 (glyA1)
Enzymes [BR:
kvr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
CIB50_0001296 (glyA1)
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GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Beta_elim_lyase
OKR_DC_1
Phage_capsid
Motif
Other DBs
NCBI-ProteinID:
QMS56584
UniProt:
A0A7D7L2V5
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All DBs
Position
1469823..1471109
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AA seq
428 aa
AA seq
DB search
MTQSPGHSVTNQPLSEVDPDVAQAIEDELGRQRSTLEMIASENFAPRAVLEAQGSVLTNK
YAEGYPGRRYYGGCEYVDVVENLARDRACKLFGADHANVQPHSGAQANTAVMAALMQPGD
TLMGLSLAHGGHLTHGMKINVSGKLYNIAAYEVDPESHRIDMDQVREQALAARPAVIVAG
WSAYSRQLDFAAFRSIADEVGAKLWVDMAHFAGLVAAGLHPNPVPHAHVTTSTVHKTLAG
PRSGVILCEADLKKKIDSAVFPGQQGGPLMHAVAAKAVAFKIAASQEFAERQQRTIEGAQ
ILADRLVSPDLAEHGVSVLTGGTDVHLTLVDLRDSELDGKQAEDLLHQAGITVNRNAVPW
DPRPPMTTSGLRIGTPALATRGFGAQEFTEVADIIAEALKPGADIAALRSRVETLTGQFP
LYPGLEEW
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgacgcaatccccgggacattccgtgaccaaccagccgctctcagaggtggatccggac
gtcgcccaggccatcgaggacgagctgggccgccagcgctcgacgctcgagatgatcgcc
tccgagaacttcgcgccgcgggccgtgctcgaggcgcagggttccgtgctgaccaacaag
tacgcggagggctacccgggccgccgctactacggcggctgcgagtacgtggacgtcgtg
gagaacctcgcccgcgaccgggcgtgcaagctcttcggcgcggaccacgcgaacgtgcag
ccccactccggcgcgcaggcgaacaccgccgtgatggccgccctcatgcagcccggtgac
acgctgatggggctctcgctcgcccacggcggccacctgacccacggcatgaagatcaac
gtctccggcaagctctacaacatcgcggcctacgaagtggaccctgagagccaccggatc
gacatggaccaggtgcgcgagcaggccctggctgcccgccccgcggtgatcgtggccggc
tggtccgcgtactcccggcagctggacttcgccgcgttccgctccatcgcggacgaggtc
ggcgcgaagctgtgggtggacatggcccacttcgccggtctcgtggccgcggggctgcac
ccgaacccggtgccccacgcgcacgtcaccacctccaccgtgcacaagaccctcgccgga
ccccgctccggtgtgatcctgtgcgaggcggacctgaagaagaagatcgactccgcggtg
ttccccggccagcagggcgggccgctgatgcacgccgtcgccgcgaaggccgtggccttc
aagatcgccgcgtcgcaggagtttgccgagcgccagcagcgcaccatcgagggtgcccag
atcctcgccgatcgcctcgtctccccggacctcgctgagcacggcgtctccgtgctcacc
gggggcacggacgtgcacctcacgctcgtggacctgcgggactccgagctggacggcaag
caggcggaggacctcctgcaccaggccgggatcaccgtcaaccgcaacgcggtgccgtgg
gacccccgcccgcccatgaccacctccgggctgcggatcggcaccccggcgctcgccacg
cgcggcttcggcgcgcaggagttcaccgaggtcgcggacatcattgccgaggcgctcaag
cccggtgcggacatcgcggccctgcgctcgcgcgtggagacgctgaccgggcagttcccc
ctgtaccccggcctcgaggagtggtga
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