Kocuria varians: CIB50_0001299
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Entry
CIB50_0001299 CDS
T06882
Symbol
exoA_2
Name
(GenBank) Exodeoxyribonuclease
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
kvr
Kocuria varians
Pathway
kvr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CIB50_0001299 (exoA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001299 (exoA_2)
Enzymes [BR:
kvr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
CIB50_0001299 (exoA_2)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
CIB50_0001299 (exoA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QMS56587
UniProt:
A0A7D7L028
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All DBs
Position
1472732..1473571
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AA seq
279 aa
AA seq
DB search
MADSGQTVRIATVNVNGIRAAYRRGMADWLAPRGVDLLCLQEVRAPDKITRELLDEDVWD
VRHTEAAAKGRAGVAIATRRDAFNGALLPVESRVGIGEEYFDDSGRWIENDVRLPNGQNL
TLVSAYVHSGEVDTLKQEDKYRFLEAMLTRLPQLAERSDHALVVGDLNVGHTELDIKNWK
GNVKNAGFLPEERAYFDRFFGDVGYVDVARSLAGDVPGPYTWWSYRGKAFDTDAGWRIDY
QMATPGLAALAAEAVVDRADSYDTRFSDHAPLVVDYRLA
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atggcggattcagggcagacggtgcgcattgccacggtgaacgtgaacggcatccgcgcg
gcgtaccgcaggggcatggcggactggctcgccccgcgcggggtggacctgctgtgcctg
caggaggtgcgcgctccggacaagatcacgcgcgagctgctggacgaggacgtctgggac
gtgcggcacaccgaggccgcggccaagggccgcgccggggtggccatcgccacgcgccga
gacgccttcaacggcgccctgctgccggtggagtcccgtgtgggcatcggcgaggagtac
ttcgacgactccgggcgctggatcgagaacgacgtccggctgcccaacggacagaacctc
acgctggtctccgcgtacgtgcactccggcgaggtggacaccctcaagcaggaggacaag
taccgcttcctggaggccatgctcacccgcctgccgcagctcgccgagcgcagcgaccac
gccctcgtggtgggggacctcaacgtgggccacactgagctggacatcaagaactggaag
gggaacgtcaagaacgcgggcttcctgcccgaggagcgcgcctacttcgaccggttcttc
ggggacgtgggctacgtggacgtggcccgcagcctcgccggggacgtgcccggtccgtac
acgtggtggtcctaccgcggcaaggcgttcgacacggacgccggttggcgcatcgactac
cagatggccaccccgggcctcgccgcgctcgcggccgaggccgtggtggaccgcgccgat
tcctatgacacccgcttctccgaccacgccccgctcgtggtcgactaccgcctggcctga
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