Kocuria varians: CIB50_0001300
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Entry
CIB50_0001300 CDS
T06882
Symbol
trpS
Name
(GenBank) Tryptophan--tRNA ligase
KO
K01867
tryptophanyl-tRNA synthetase [EC:
6.1.1.2
]
Organism
kvr
Kocuria varians
Pathway
kvr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CIB50_0001300 (trpS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kvr01007
]
CIB50_0001300 (trpS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvr03016
]
CIB50_0001300 (trpS)
Enzymes [BR:
kvr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.2 tryptophan---tRNA ligase
CIB50_0001300 (trpS)
Amino acid related enzymes [BR:
kvr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
CIB50_0001300 (trpS)
Transfer RNA biogenesis [BR:
kvr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CIB50_0001300 (trpS)
Prokaryotic type
CIB50_0001300 (trpS)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1b
ribosomal_L24
PEN-2
Phage_T7_Gp5_9
AtoS_N
DUF6950
Motif
Other DBs
NCBI-ProteinID:
QMS56588
UniProt:
A0A7D7L237
LinkDB
All DBs
Position
1473755..1474783
Genome browser
AA seq
342 aa
AA seq
DB search
MTEQSTQHRAVPRVVSGVQPSADSLHLGNYVGALRNWVDMQDDNDCVFFVADLHSITTGQ
DPATMSERTRVTAAQYIAAGIDPERSTLLIQSQVPEHTQLSWVLNCITGYGEAARMTQFK
DKSVKQGAENTTVGLFTYPVLMAADILVYQANQVPVGEDQRQHLELTRTLAQRFNSRFGE
TFAVPDAKILENSAKVYDLQNPTAKMSKSAPSDAGLVRLLDPAKKNAKKIKSAVTDDGTE
VRFDRQAKPGISNLLTIYSSLTGTPVGTLEAEYEGRMYGHLKVDLAEVVTQTLDPIQKRA
QELLDDPAELDRLLARGADKARGIAAQTLREVYDRMGFLPGV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaacagagcacgcagcaccgcgcggtaccgcgcgtcgtctcgggtgtgcagccc
tccgcggacagcctgcacctgggcaactacgtgggggcgctgcgcaactgggtggacatg
caggacgacaacgactgcgttttcttcgtggcggacctgcactcgatcacgacgggtcag
gacccggccacgatgtccgagcgcacccgggtgaccgccgcgcagtacattgccgcgggc
atcgacccggagcgctccacgttgctcatccagtcccaggtgcccgagcacacgcagctc
tcgtgggtgctcaactgcatcacgggctacggcgaggccgcgcgcatgacccagttcaag
gacaaatccgtgaagcagggagcggagaacaccaccgtgggcctgttcacctacccggtg
ctgatggccgcggacatcctcgtttaccaggcgaaccaggtgcccgtgggggaggaccag
cgtcagcacctggaactgacccgtaccctcgcgcagcgcttcaactcccgcttcggggag
acctttgccgtgccggacgccaagatcctggagaactccgccaaggtctacgacctgcag
aaccccacggcgaagatgtccaaatccgcgccgtcggacgccgggctcgtgcggctgctg
gacccggccaagaagaacgccaagaagatcaagtccgcagtgaccgatgacggcaccgag
gtgcgattcgaccggcaggccaagccgggcatctcgaacctgctcaccatctactcctcg
ctcacgggcacgccggtgggcacgctcgaggccgagtacgagggcaggatgtacggccac
ctcaaggtggacctcgcggaggtggtcacccagaccctggaccccatccagaagcgcgcg
caggagctgctggacgaccccgctgaactggaccgtctgctcgcccgcggcgcggacaag
gcgcggggcatcgccgcccagaccctgcgcgaggtctacgaccggatggggttcctgccc
ggcgtctga
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