Kocuria varians: CIB50_0001303
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Entry
CIB50_0001303 CDS
T06882
Symbol
sdhB
Name
(GenBank) Succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
kvr
Kocuria varians
Pathway
kvr00020
Citrate cycle (TCA cycle)
kvr00190
Oxidative phosphorylation
kvr00650
Butanoate metabolism
kvr00720
Other carbon fixation pathways
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
kvr01120
Microbial metabolism in diverse environments
kvr01200
Carbon metabolism
Module
kvr_M00009
Citrate cycle (TCA cycle, Krebs cycle)
kvr_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
kvr_M00149
Succinate dehydrogenase, prokaryotes
kvr_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
CIB50_0001303 (sdhB)
00650 Butanoate metabolism
CIB50_0001303 (sdhB)
09102 Energy metabolism
00190 Oxidative phosphorylation
CIB50_0001303 (sdhB)
00720 Other carbon fixation pathways
CIB50_0001303 (sdhB)
Enzymes [BR:
kvr01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
CIB50_0001303 (sdhB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Fer2_3
Fer4_8
Fer4_10
Fer4_17
Fer4_7
Fer4_9
Fer4
Fer4_16
Fer4_2
Fer4_4
Fer4_6
Fer4_18
Fer4_3
Fer4_20
Fer4_21
Motif
Other DBs
NCBI-ProteinID:
QMS56591
UniProt:
A0A7D7KZM6
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All DBs
Position
complement(1476747..1477529)
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AA seq
260 aa
AA seq
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MSTAVTENQNQDAQQPAAEGEEAIPTYDIVLKVRRYNPEFDSEAHWDEWPLTMYGTDRVL
DALHKVKWELDGSLSFRRSCAHGVCGSDAMRINGRNRLACKTLLKDLDLSKPITVEPIKG
LPCEKDLIVDMEPFFQSYREIMPFLVNEDHTPTGERYQSQEDRARFDDTTKCILCAACTS
SCPVFWTDGQYFGPAAIVNAHRFIFDSRDQAGDMRLEILNDKEGVWRCRTTFNCTEACPR
GIQVTKAIAEVKKAVFASAL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtccactgcagtcaccgagaaccagaaccaggacgctcagcagcccgccgccgagggc
gaagaggccatccccacgtacgacatcgtgctcaaggtgcgccgctacaaccccgagttc
gactccgaggcgcactgggacgagtggcccctgaccatgtacggcacggaccgcgtgctg
gacgccctgcacaaggtcaagtgggagctcgacggctcgctgtccttccgccgctcgtgc
gcgcacggcgtgtgcggttcggacgccatgcgcatcaacggccgcaaccggctcgcgtgc
aagaccctgctcaaggacctggacctgtccaagcccatcacggtggagcccatcaagggt
ctgccgtgcgagaaggacctgatcgtggacatggagccgttcttccagtcctaccgcgag
atcatgcccttcctggtgaacgaggaccacactcccactggggagcggtaccagtcccag
gaggaccgtgcgcgcttcgacgacaccaccaagtgcatcctgtgcgcggcgtgcacgtcc
tcgtgccccgtgttctggacggacggccagtacttcggccccgccgcgattgtgaacgcg
caccggttcatcttcgactcgcgtgaccaggcgggtgacatgcgcctggagatcctcaac
gacaaggagggtgtgtggcgctgccgcaccaccttcaactgcaccgaggcgtgcccccgc
ggcatccaggtgaccaaggccatcgccgaggtcaagaaggcggtcttcgcctccgccctg
tga
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