Kocuria varians: CIB50_0001327
Help
Entry
CIB50_0001327 CDS
T06882
Symbol
tdcB
Name
(GenBank) L-threonine ammonia-lyase
KO
K01754
threonine dehydratase [EC:
4.3.1.19
]
Organism
kvr
Kocuria varians
Pathway
kvr00260
Glycine, serine and threonine metabolism
kvr00290
Valine, leucine and isoleucine biosynthesis
kvr01100
Metabolic pathways
kvr01110
Biosynthesis of secondary metabolites
kvr01200
Carbon metabolism
kvr01230
Biosynthesis of amino acids
Module
kvr_M00570
Isoleucine biosynthesis, threonine => 2-oxobutanoate => isoleucine
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
CIB50_0001327 (tdcB)
00290 Valine, leucine and isoleucine biosynthesis
CIB50_0001327 (tdcB)
Enzymes [BR:
kvr01000
]
4. Lyases
4.3 Carbon-nitrogen lyases
4.3.1 Ammonia-lyases
4.3.1.19 threonine ammonia-lyase
CIB50_0001327 (tdcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
ACT
ACT_4
ACT_6
ACT_AHAS_ss
Smr
Motif
Other DBs
NCBI-ProteinID:
QMS56614
UniProt:
A0A7D7PS09
LinkDB
All DBs
Position
1503067..1504314
Genome browser
AA seq
415 aa
AA seq
DB search
MAHPDLPVTVEDVRRAATLLEGVTERTPLAHSRALSRALGSEVYLKCENLQRAGSFKVRG
AYVRMSQLSDEEKARGVVAASAGNHAQGVALAAAKLGIEARIYMPLGAALPKIAATQDHG
AEVVLHGSTVDEALAEAQRFSDQTGAVFVHPFDHVDIIAGQGTIGLEIFDQLPTVDTVIA
GVGGGGLLAGVSVAIKAKAREQGRDIRVIGVQAENAAAYPPSLAGDAIVTLSRVSTIADG
IAVGRPGQLPFTVIRELADDVVTVSEDSLAQALIFMLERNKMVVEPAGAVGVAAILEGDL
KESHPDLGNTVVLLSGGNIDPMLMLKVIQRGLSAAGRYMTVRMMLTDRPGELAQISQIIA
DLDANVTGVDHTRIGGSLSMGDVSITIDMETKGHEHCDQVIAELEAHGFHPVIAH
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
gtggcccacccagatctgcccgtaacggtggaggatgtccgccgtgccgccacgctgctg
gagggggtgaccgagcggacgccgctggcccactcccgggcgctgtcgcgcgcgctcggt
tcggaggtctacctcaagtgcgagaacctccagcgcgcgggctccttcaaggtgcgcggc
gcgtacgtgcggatgtcgcagctctcggacgaggagaaggccaggggagtggtggcggcc
tcggccggcaaccacgcccagggcgtggccctcgctgccgccaagctcggcatcgaggcg
cggatctacatgccgctcggtgcggcgctgcccaagatcgcggccacccaggaccacggc
gcggaagtggtgctgcacggctccaccgtggacgaggcgctcgcggaggctcagcgcttc
tcggaccagaccggtgcggtgttcgtgcaccccttcgaccacgtggacatcattgccggg
cagggcacgatcggcctggagatcttcgaccagctgcccaccgtggacaccgtgatcgcg
ggagtgggtggaggcgggctgctcgccggcgtctcggtggccatcaaggcgaaggcccgt
gaacagggccgggacatccgcgtgatcggcgtacaggcggagaacgccgccgcctacccg
ccgtcgctcgccggtgatgccatcgtgacgctgtcccgggtctccacgatcgcggacggc
atcgcggtgggccgcccggggcagctgcccttcaccgtgatccgggagctcgcggacgac
gtcgtgacggtctccgaggactcgctcgcccaggcgctgatcttcatgcttgagcgcaac
aagatggtcgtggagcccgccggcgcggtgggcgtggccgcaatcctcgaaggcgacctc
aaggagagccacccggacctcggcaacacggtggtgctgctctccggcggcaacatcgac
cccatgctgatgctcaaggtcatccagcgtggtctcagcgcagcgggacgctacatgacg
gtcaggatgatgctgaccgaccgccccggcgagctcgctcagatctcgcagatcatcgcg
gacctggacgccaacgtcacgggcgtggaccacacccgcatcggcggttccctgtccatg
ggggacgtgtccatcaccatcgacatggagaccaagggccacgagcactgcgaccaggtg
atcgccgagctggaggcgcacggcttccaccccgtgatcgcgcactga
DBGET
integrated database retrieval system