KEGG   Kocuria varians: CIB50_0001390
Entry
CIB50_0001390     CDS       T06882                                 
Symbol
rfbC
Name
(GenBank) putative dTDP-4-dehydrorhamnose 3,5-epimerase
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
kvr  Kocuria varians
Pathway
kvr00521  Streptomycin biosynthesis
kvr00523  Polyketide sugar unit biosynthesis
kvr00541  Biosynthesis of various nucleotide sugars
kvr01100  Metabolic pathways
kvr01110  Biosynthesis of secondary metabolites
kvr01250  Biosynthesis of nucleotide sugars
Module
kvr_M00793  dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:kvr00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 Biosynthesis of various nucleotide sugars
    CIB50_0001390 (rfbC)
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    CIB50_0001390 (rfbC)
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    CIB50_0001390 (rfbC)
Enzymes [BR:kvr01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     CIB50_0001390 (rfbC)
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     CIB50_0001390 (rfbC)
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd NAD_binding_4 Polysacc_synt_2
Other DBs
NCBI-ProteinID: QMS56676
UniProt: A0A7D7PZ30
LinkDB
Position
1575886..1577325
AA seq 479 aa
MTAQEITVHESGIDGLLFVDLPVHGDNRGWFKENWQRAKAVAAGLPDASFVQQNISFNGT
RGTTRGIHAEPWDKYVSVATGRIFGAWVDLREGPGFGTVLTREITPATAVFVPRGVGNAF
QTLEDATAYAYLVTDHWRADAGDEYSFVNLGDPHLGIEWPVPLADAELSAKDRAHPPLDD
VAPLPPAPVLVLGARGQVGLALTALLTETGVPFTAWTRDELDLADPASWPDEVRSGGGLR
RYRAVVNAAAFTAVDAAETDEGREEAWAVNASGVAALAAACSRARVTLVHLSTDYVLDGA
LPLGSSYEPDSPVAPVSVYGQSKAAGEMAVRTCSRHYVVRTSWVIGEGKNFVATMARLAE
QGVDPTVVDDQHGRLTGAADLAAGILHLLDTRAPYGTYHLTGSGEPCTWADVARWVFEDL
GHDPDRVTPVSTAEYTAGRAPGAPRPTNSVLDISAVLNAGFTPQDSRAVARQGAMAFGD
NT seq 1440 nt   +upstreamnt  +downstreamnt
gtgacggcacaggagatcacggtccacgagagcgggatcgacggcctgctgttcgtggac
ctgcccgtccacggggacaaccgcgggtggttcaaggagaactggcagcgcgccaaggcc
gtggccgcgggcctgccggacgcgtccttcgtgcagcagaacatctccttcaacgggacg
cgcggcaccacgcgcggcatccacgcggagccgtgggacaagtacgtctcggtggccacc
ggtcggatcttcggcgcgtgggtggacctgcgcgaggggccgggcttcggcacggtcctc
acgcgggagatcaccccggcgacggcggtgttcgtgccccgcggcgtgggcaacgcgttc
cagacgctggaggacgccacggcctacgcgtacctggtcaccgaccactggcgcgcggac
gcgggggacgagtactcgttcgtgaacctgggggacccgcacctgggcatcgagtggccg
gttccgctcgcggacgcggagctctcggccaaggatcgcgcgcacccgcccctcgacgac
gtcgccccgctgcctccggcgcccgtgctcgtcctgggtgcccgcggccaggtggggctc
gccctgaccgcgctgctgacggagaccggcgtgcccttcaccgcctggacccgtgacgag
ctggacctcgcggaccccgcctcctggcccgacgaggtgcgctccgggggcgggctgcgt
cgctaccgtgccgtggtcaacgccgccgccttcaccgctgtcgacgccgccgagacggac
gagggacgcgaggaagcgtgggcggtcaatgcctcgggagtcgccgcactggccgcagcg
tgctcccgggccagggtgacgctcgtgcacctgtccacggactacgtcctcgacggcgcc
ctcccgctcggctcctcgtacgagcccgactcaccggtggcaccggtgtccgtgtacggg
cagtcgaaggcggcgggggagatggccgtgcgcacgtgctcccggcactacgtggtgcgc
accagctgggtcatcggtgaggggaagaacttcgtggcgaccatggcgcgcctggccgag
cagggggtggaccccaccgttgtcgacgaccagcacgggcggctcaccggcgccgccgat
ctcgccgcgggcatcctgcacctgctggacacccgcgccccgtacggcacgtaccacctg
acgggctcaggggagccgtgcacgtgggcggacgtggcccgctgggtgttcgaggacctc
ggccacgacccggacagggtcacgcccgtcagcaccgcggagtacacggcggggcgggca
cccggtgcgccgcggccaacgaacagcgtgctcgacatttccgcggtcctgaacgcgggc
ttcaccccgcaggacagtcgcgcggtggctcgtcagggcgcgatggcgttcggcgactga

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