Kocuria varians: CIB50_0001404
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Entry
CIB50_0001404 CDS
T06882
Symbol
kdgR_2
Name
(GenBank) Pectin degradation repressor protein KdgR
KO
K13641
IclR family transcriptional regulator, acetate operon repressor
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kvr03000
]
CIB50_0001404 (kdgR_2)
Transcription factors [BR:
kvr03000
]
Prokaryotic type
Helix-turn-helix
IclR family
CIB50_0001404 (kdgR_2)
BRITE hierarchy
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GFIT
Motif
Pfam:
IclR_C
HTH_IclR
MarR_2
TrmB
Dimerisation
Motif
Other DBs
NCBI-ProteinID:
QMS56690
UniProt:
A0A7D7KYR5
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Position
complement(1594255..1594989)
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AA seq
244 aa
AA seq
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MVKALDALALLGEHPDGVTAAQMARKTSHPFSTCYRLLNTLVSTGFARYDAQDKRYHLGL
RVFQLAHTVAAPQGFESSAVPVLQRLTERTRESSVLHVPDGDRALTVRTEGGPQFRATTD
PGDRAALHSTASGKILLALSEPAASEQLLRDIELEPRTAHSLTDREELARQVATARERGW
TSQSEENDLGMVAIAAPVLTPSGRLLGAVTLAAPLFRSTVAQLEEHVPALLDATRELGLV
LPER
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
gtggtcaaggccctcgacgccctcgctctgctcggagagcacccggacggcgttactgcg
gcccagatggcgcgcaagacgtcccaccccttcagcacgtgctaccggctgctgaacacg
ctcgtgtccaccggcttcgcccgatacgacgcgcaggacaagcgctaccacctgggactg
cgcgtgttccagctggcgcacaccgtggcggccccccagggtttcgagagctccgccgtc
cccgtgctgcagcggctcaccgaacgcacccgggaaagctccgtgctccatgtgccggac
ggcgacagggccctcaccgtgcgcacggagggcggtccgcagttccgcgccaccacggat
ccgggtgaccgcgcggcactgcacagcacggcatcaggcaagatcctgctcgccctctcc
gagcccgccgctagcgagcagctgctgcgggacatcgagctcgagccgcgcaccgcgcac
tcgctcacggaccgggaggagctcgcccgacaggtcgccaccgcccgcgagcgcggctgg
acgtcccagagcgaggagaacgacctcgggatggtggcgatcgcggcccccgtcctgacc
ccgtccgggcggctgctgggcgcggtgacacttgcggctcccctgttccgcagcacggtg
gcccagctcgaggagcacgttcccgcgctgctcgacgccacgcgtgaactcggactggtc
ctgcccgaacggtga
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