Kocuria varians: CIB50_0001516
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Entry
CIB50_0001516 CDS
T06882
Symbol
miaB
Name
(GenBank) tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvr03016
]
CIB50_0001516 (miaB)
Enzymes [BR:
kvr01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
CIB50_0001516 (miaB)
Transfer RNA biogenesis [BR:
kvr03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
CIB50_0001516 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
B12-binding
Motif
Other DBs
NCBI-ProteinID:
QMS56797
UniProt:
A0A7D7Q3L1
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All DBs
Position
1714341..1715879
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AA seq
512 aa
AA seq
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MPRSVQTQPLQPSAPHEAFDAREAAPAYEVRTLGCQMNAHDSERITGLLETAGYVPAVDR
EPDLVVFNTCAVRENADNKLYGQLGQLAPVKRRNDRLQIAVGGCLAQKDRATIVEKAPWV
DVVFGTHNIGSLPVLLERARHNEQAQVEILEALETFPSALPTKREQAYAGWVSISVGCNN
TCTFCIVPQLRGKEKDRRPGDILAEVHALVDSGAVEVTLLGQNVNSYGVEFGDRGAFAKL
LRACGDIEGLERVRFTSPHPAAFTDDVIDAMAETPNVMPQLHMPLQSGSDRILKDMRRSY
RSKKFLGILERVRERIPGAAITTDIIVGFPGETEQDFQDTLDVVAASEFSSAFTFQYSVR
PGTPAGEMADQVPAAVVQERFERLTALQDEISARLNRGLIGSRAEILVSAQSGRKAESTH
RLSGRGRDQRLIHFSVPEGAPQPRPGDVVSVPVTGAAAYHLLADPRDASEYELRRTRGGG
AWEAAQAESCAAPSSSGAPGAVGLGMPSLRRP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgccccggtcggttcagacgcagcccctccagccctccgctccgcacgaggcgttcgac
gcccgcgaggccgcaccggcctacgaggtgcgcacgctggggtgccagatgaacgcccac
gactccgagcgcatcaccggtctcctggagacagccggctacgttccggccgtggaccgg
gagccggacctcgtcgtcttcaacacgtgtgcggtgcgcgagaacgcggacaacaagctc
tacggtcagctcggtcagctcgccccggtcaagcgccgcaacgaccggctgcagatcgcc
gtcggcggctgcctggcccagaaggaccgcgctacgatcgtggagaaggcaccgtgggtg
gacgtggtcttcggcacgcacaacatcggctccctgccggtgctgctggagcgagcccgc
cacaacgagcaggcccaggtggagatcctggaggctctggagaccttcccctccgcgctg
cccaccaagcgggaacaggcctacgccggatgggtgtcgatctccgtggggtgcaacaac
acgtgcacgttctgcatcgtcccgcagctgcgcggcaaggagaaggaccggcggcccgga
gacatcctcgccgaggtgcacgccctggtggactccggcgcggtggaggtgacgctgctc
gggcagaacgtgaactcctacggcgtcgagttcggagaccgcggcgcgttcgccaagctg
ctgcgcgcgtgcggcgacatcgaggggctggagcgcgtccggttcacgagcccgcacccg
gcggcgttcacggacgacgtgatcgacgccatggccgagacccccaacgtgatgccgcag
ctgcacatgccgctgcagtccggttcggaccgcatcctgaaggacatgcgccgttcctac
cgctcgaagaagttcctggggatcctggaacgggtccgcgagcgcatccccggcgcggcc
atcaccacggacatcatcgtgggcttccccggggagacggagcaggacttccaggacacg
ctggacgtggtggccgcttccgagttctcctcggcgttcacgttccagtactcggtgcgc
ccgggcaccccggccggtgagatggcggaccaggttccggccgccgtcgtgcaggagcgc
ttcgagcgcctcaccgcactgcaggacgagatcagcgcccgcctgaaccgtggactgatc
ggttcccgcgccgagatcctcgtgagcgcgcagtcgggtcgcaaggcggagagcacccac
cggctgtcgggcaggggccgcgaccagcgcctgatccacttcagcgtgcccgagggtgcg
ccgcagccccggcccggggacgtggtgagcgtccccgtgacgggggccgccgcgtaccac
ctgctcgcggatccgcgtgacgcctccgagtacgagctgcgccgcacccgcggcgggggc
gcctgggaggcggcgcaggccgagtcctgcgccgcgccgtcgtcgtccggagccccgggg
gcagtggggctcgggatgccgtccctgcggagaccctga
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