Kocuria varians: CIB50_0001548
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Entry
CIB50_0001548 CDS
T06882
Symbol
lcfB
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
kvr
Kocuria varians
Pathway
kvr00061
Fatty acid biosynthesis
kvr00071
Fatty acid degradation
kvr01100
Metabolic pathways
kvr01212
Fatty acid metabolism
kvr02024
Quorum sensing
kvr04146
Peroxisome
Module
kvr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
CIB50_0001548 (lcfB)
00071 Fatty acid degradation
CIB50_0001548 (lcfB)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
CIB50_0001548 (lcfB)
09145 Cellular community - prokaryotes
02024 Quorum sensing
CIB50_0001548 (lcfB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
kvr01004
]
CIB50_0001548 (lcfB)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
kvr04147
]
CIB50_0001548 (lcfB)
Enzymes [BR:
kvr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
CIB50_0001548 (lcfB)
Lipid biosynthesis proteins [BR:
kvr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
CIB50_0001548 (lcfB)
Exosome [BR:
kvr04147
]
Exosomal proteins
Exosomal proteins of breast milk
CIB50_0001548 (lcfB)
Exosomal proteins of breast cancer cells
CIB50_0001548 (lcfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PilZ
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
QMS56829
UniProt:
A0A7D7L168
LinkDB
All DBs
Position
1747218..1748732
Genome browser
AA seq
504 aa
AA seq
DB search
MTNLATLLTTSAAKYTSDPAVILDDLRLSYGQLDDLSARGAALLTANGIRPGDRVALVLP
NVPHMAVLYYAILRAGGIVVPLNPLLTPRELTYHFQDAGVSFVLAWEDMAQASQKAVEEL
DGVAVLPISAQGTVGHLMSVEPAAEVVEREDEDTAVLLYTSGTTGRPKGAELTHHNLHSN
AEIAGELFDLRNGDVMFGGLPFFHVFGQTVALNGVVARGAAVSLLPRFHPVKALEILRRD
HVNIFVGVPTMYVALLHELGKGELTTEGIDLRAGVSGGSAMPVEVMAKFEKVFDTSVYEG
YGLSETSPIVCFNQPGNVRKPGSIGTVVRGAEIRIVDGDDNEVPTNEVGEIAVRGQYVMK
RYWNKPEATEEAMRNGWFHTGDMGRKDEDGAIFIVDRKKDMILRGGYNVYPREIEEVVYQ
FPGVVEAAVVGVPSEKHGEEVGAVVVFESGVLESKGREALSQELDAFVQERVAKYKYPRI
YRITDELPKGPTGKILKRELSLDA
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacctggccacgctgctcaccacctcggccgcgaagtacacgtccgatcccgcc
gtgatcctggatgacctgcgcctgagctacgggcagctggacgacctctccgcccgcggc
gccgccctgctcaccgccaacggcatccgccccggggaccgcgtggcgctcgtgctgccc
aacgtgccccacatggcggtgctgtactacgcgatcctgcgcgccggcggcatcgtggtc
ccgctgaacccgctgctcacccctcgcgagctgacctaccacttccaggacgcgggcgtg
agcttcgtgctcgcgtgggaggacatggcccaggccagccagaaggcggtcgaggagctc
gacggcgtggccgtgctgccgatcagcgcccagggcaccgtggggcacctgatgtcggtt
gagccggcggccgaggtcgtcgagcgcgaggacgaggacacggcggtgctgctgtacacg
tccggcaccaccgggcgccccaagggtgcggagctgacccaccacaacctgcactcgaac
gccgagattgccggggagctgttcgacctgcgcaacggggacgtgatgttcggagggctg
cccttcttccacgtcttcggccagacggttgccctcaacggggtggtggcccgcggcgcc
gcggtctccctgctgccgcgcttccacccggtcaaggccctggagatcctgcgccgggac
cacgtcaacatcttcgtgggcgtgcccaccatgtacgtggcgctgctgcacgagctgggc
aagggcgagctcaccacggaggggatcgacctgcgcgccggcgtctccggcggctccgcc
atgcccgtggaggtcatggccaagttcgagaaggtcttcgacaccagcgtgtacgagggc
tacggcctctcggagacctccccgatcgtgtgcttcaaccagccgggcaacgtccgcaag
cccgggtccatcggcacggtcgtgcgcggggcggagatccggatcgtggacggggacgac
aacgaggtccccaccaacgaggtcggggagatcgcggtgcgcgggcagtacgtgatgaag
cgctactggaacaagcccgaggccaccgaggaggccatgcgcaacggctggttccacacc
ggggacatgggccgcaaggacgaggacggcgccatcttcatcgtggaccgcaagaaggac
atgatcctgcgcggcggctacaacgtgtacccccgcgagatcgaggaggtcgtctaccag
ttcccgggtgtcgtggaggccgcggtcgtgggcgtgcccagcgagaagcacggcgaggag
gtcggcgccgtcgtcgtcttcgagtccggtgtgctcgagtccaagggccgggaggcgctg
agccaggagctggacgcgttcgtgcaggagcgggtggccaagtacaagtacccccgcatc
taccgcatcacggacgagctgcccaagggccccacgggtaagatcctcaagcgcgagctc
tcgctcgatgcataa
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