Kocuria varians: CIB50_0001633
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Entry
CIB50_0001633 CDS
T06882
Symbol
pbpB
Name
(GenBank) Penicillin-binding protein PbpB
KO
K03587
cell division protein FtsI (penicillin-binding protein 3) [EC:
3.4.16.4
]
Organism
kvr
Kocuria varians
Pathway
kvr00550
Peptidoglycan biosynthesis
kvr01100
Metabolic pathways
kvr01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CIB50_0001633 (pbpB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CIB50_0001633 (pbpB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kvr01011
]
CIB50_0001633 (pbpB)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
kvr03036
]
CIB50_0001633 (pbpB)
Enzymes [BR:
kvr01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
CIB50_0001633 (pbpB)
Peptidoglycan biosynthesis and degradation proteins [BR:
kvr01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
CIB50_0001633 (pbpB)
Chromosome and associated proteins [BR:
kvr03036
]
Prokaryotic type
Chromosome partitioning proteins
Divisome proteins
CIB50_0001633 (pbpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
QMS56912
UniProt:
A0A7D7PTB4
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All DBs
Position
1846371..1848173
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AA seq
600 aa
AA seq
DB search
MQVGIAVLLVLLLLVVGKLFWIQGLDPSGRAEAAAAQRTLVEPIPAVRGEITDSQGTVLA
RTLQRYDITVDQTAVTSVDVPSTDGSTQTVTPTQAVYKIADALGMSDTDVKKALDGDKTF
NYVARGVTPEQYNKLRELNLPYVYGQPTFQRSYPDGSLGGSVVGFLGGDSQALGGIEQTQ
DSVLRGTDGERRFEISGDGVRIPVAPQEQKAAQNGSDVQLSLDSDVQFFAEQAVRERAKA
LKAEWGTAVVMDVKTGKVLALADTSSVDPNAPGEAKAEDLGVRAVTQSVEPGSTEKIATL
AGALDRGIVTPSTQITVPSYLQIGSEKITDAFDHPAQNRTVAGIIGDSMNTGTVIMGSKM
DKQARHDNLANFGVGQATGIELPGESTGILAPADQWDARQEYTVLFGQGVSQTPLRTASI
FQAVANKGRQIEPRIVNSVTAADGTVSTPQSPEPKQVLSESAAQDTLDVMENVVTQGGAK
EAAVPGYRVGGKTGTAEAPSDSGGYDGYTTSFVGVAPMEDPQYLVAVTMQRPQGDVHTVG
VTSTFSTIMSQVLHHYNVAPSTTEGPKFEMQVPENIKRDVTPENALEQTWPEPGRDESQG
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtgggcatcgccgtgctgctggtgctgctgctgctggtggtgggcaagctcttc
tggatccagggactggaccccagcggccgggcggaggccgcggcggcgcagcgcacgctg
gtggagccgatcccggcggtgcgcggtgagatcaccgactcccagggcacggtgctcgcc
cgcacgctgcagcgctacgacatcacggtggaccagacggcggtcacctcggtggacgtc
cccagcacggacggctccacccagaccgtgacccccacccaggcggtgtacaagatcgcc
gacgccctgggaatgagcgacaccgacgtcaagaaggcgctggacggagacaagaccttc
aactacgtggcccgcggcgtgacccccgagcagtacaacaagctgcgggagctgaacctg
ccctacgtctacggccagcccacgttccagcgcagctacccggacggctccctgggcggc
tcggtggtgggcttcctcggcggggacagccaggcgctgggcggcatcgagcagacccag
gactccgtgctgcgcggcacggacggcgagcggcgcttcgagatctcgggcgacggcgtg
cgcatccccgtggccccgcaggagcagaaggccgcccagaacggctcggacgtgcagctc
tccctggacagcgacgtgcagttcttcgccgagcaggcggtgcgcgagcgcgccaaggcc
ctgaaggcagagtggggcacggccgtcgtgatggacgtgaagaccggaaaggtgctggcg
ctggcggacacctcctccgtggatccgaacgcgcccggggaggccaaggcggaggacctc
ggggtgcgcgcggtgacgcagtcggtggagccgggctccaccgagaagatcgccacactc
gccggtgcgctggaccgggggatcgtgaccccgtccacccagatcacggtgccctcctac
ctgcagatcggctcggagaagatcacggacgcgttcgaccacccggcgcagaaccgcacg
gtcgcgggcatcatcggggactccatgaacacgggaacggtgatcatgggctccaagatg
gacaagcaggcccgccacgacaacctcgcgaacttcggggtgggccaggccacgggcatc
gagctgcccggcgagtccaccggcatcctcgctcccgcggaccagtgggacgcccgccag
gagtacacggtgctcttcggccagggcgtctcccagaccccgctgcgcacggcctcgatc
ttccaggccgtggccaacaagggccgtcagatcgagccgcgcatcgtgaactccgtcacg
gcggcggacggcaccgtgagcacgccgcagagccccgagcccaagcaggtgctctccgag
tccgcggcccaggacacgctggacgtgatggagaacgtggtgacccagggcggtgccaag
gaggccgccgtgccgggctaccgcgtgggcggcaagacgggcacggccgaggccccgagc
gacagcggcggctacgacggctacaccacctcgttcgtgggcgtggcgcccatggaggac
ccgcagtacctggtggccgtgaccatgcagcgcccccagggcgacgtccacacggtgggg
gtcacttccacgttctccacgatcatgtcccaggtgctccaccactacaacgtggcgccc
tccaccaccgagggcccgaagttcgaaatgcaggtcccggagaacatcaagcgggacgtg
accccggagaacgccctcgagcagacctggcccgagccgggcagagacgagtcccagggc
taa
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