Kocuria varians: CIB50_0001675
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Entry
CIB50_0001675 CDS
T06882
Symbol
orn
Name
(GenBank) Oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kvr03019
]
CIB50_0001675 (orn)
03009 Ribosome biogenesis [BR:
kvr03009
]
CIB50_0001675 (orn)
Messenger RNA biogenesis [BR:
kvr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CIB50_0001675 (orn)
Ribosome biogenesis [BR:
kvr03009
]
Eukaryotic type
Pre-60S particles
RNases
CIB50_0001675 (orn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
QMS56950
UniProt:
A0A7D7KZ01
LinkDB
All DBs
Position
complement(1889779..1890384)
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AA seq
201 aa
AA seq
DB search
MWIDCEMTGLSLSDDALIEVAALVTDDELNVLGDGVDVVIKPPQAALEQMNDFVRNMHET
SGLLPELENGTDMATAQAKVLDYIREWVPEPGKAPLGGNSVGTDKTFLSRDMPELVDHLH
YRIIDVSTIKELARRWYPRAYFQAPEKTGNHRALGDIEDSIDELRYYRHILFPGDPGPTS
DDARRVAALIKASPTRTAERG
NT seq
606 nt
NT seq
+upstream
nt +downstream
nt
gtgtggatcgactgcgagatgacggggctgtccctgtccgatgacgcgttgatcgaggtg
gccgcgctcgtgaccgacgacgagctcaacgtgctgggcgacggcgtggacgtggtgatc
aagccgccgcaggccgccctggagcagatgaacgacttcgtgcggaacatgcacgagacg
tccgggctgctgcccgagctggagaacggcacggacatggccaccgcccaggcgaaggtt
ctcgactacatccgcgagtgggtgcccgagcccggcaaggcaccgctgggcggcaactcc
gtgggcacggacaagacgttcctgtcccgggacatgcccgagctcgtggaccacctgcac
taccggatcatcgacgtctccacgatcaaggagctcgcacggcgctggtacccgcgggcg
tacttccaggccccggagaagaccggcaaccaccgcgcgctcggggacatcgaggactcc
atcgacgagctgcgctactaccgccacatcctgttccccggtgacccgggccccacgtcc
gacgacgcccggcgggtcgcggcactcatcaaggcctcccccacgcgcacggccgagcgg
ggttga
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