KEGG   Kocuria varians: CIB50_0001685
Entry
CIB50_0001685     CDS       T06882                                 
Symbol
pdhD
Name
(GenBank) Dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
kvr  Kocuria varians
Pathway
kvr00010  Glycolysis / Gluconeogenesis
kvr00020  Citrate cycle (TCA cycle)
kvr00260  Glycine, serine and threonine metabolism
kvr00280  Valine, leucine and isoleucine degradation
kvr00310  Lysine degradation
kvr00380  Tryptophan metabolism
kvr00620  Pyruvate metabolism
kvr00630  Glyoxylate and dicarboxylate metabolism
kvr00640  Propanoate metabolism
kvr00785  Lipoic acid metabolism
kvr01100  Metabolic pathways
kvr01110  Biosynthesis of secondary metabolites
kvr01120  Microbial metabolism in diverse environments
kvr01200  Carbon metabolism
kvr01210  2-Oxocarboxylic acid metabolism
kvr01240  Biosynthesis of cofactors
Module
kvr_M00009  Citrate cycle (TCA cycle, Krebs cycle)
kvr_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
kvr_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
kvr_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:kvr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    CIB50_0001685 (pdhD)
   00020 Citrate cycle (TCA cycle)
    CIB50_0001685 (pdhD)
   00620 Pyruvate metabolism
    CIB50_0001685 (pdhD)
   00630 Glyoxylate and dicarboxylate metabolism
    CIB50_0001685 (pdhD)
   00640 Propanoate metabolism
    CIB50_0001685 (pdhD)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    CIB50_0001685 (pdhD)
   00280 Valine, leucine and isoleucine degradation
    CIB50_0001685 (pdhD)
   00310 Lysine degradation
    CIB50_0001685 (pdhD)
   00380 Tryptophan metabolism
    CIB50_0001685 (pdhD)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    CIB50_0001685 (pdhD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:kvr04147]
    CIB50_0001685 (pdhD)
Enzymes [BR:kvr01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     CIB50_0001685 (pdhD)
Exosome [BR:kvr04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   CIB50_0001685 (pdhD)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 HI0933_like FAD_binding_2 DAO GIDA AlaDh_PNT_C FAD_oxidored NAD_binding_8 Amino_oxidase 3HCDH_N Trp_halogenase NAD_binding_9
Other DBs
NCBI-ProteinID: QMS56960
UniProt: A0A7D7Q5C4
LinkDB
Position
complement(1902855..1904222)
AA seq 455 aa
MADNQYDILVLGGGSAGYSAALRAVQLGYSVALIEKEKLGGTCLHWGCIPTKAYLHSAEL
AEGARESEKYGIKATLESIDMGAVRDYKNKIVQGKYKGLTGLMKMRKVDVVAGNGKLTGP
NTIDVDGTTYTGKHIILATGSVSKTLGIEIGGRVMTSTEALEIDFVPKSAIVLGGGVIGC
EFASMWRSFGVDVTVIEGLPHLVANEDPAIIKTLEREFKKRGIKYNLGTFFEKVEQNDDG
AKVTLADGKEFEADVVLVAVGRGPNTADMGFEEQGIPMDRGFVTPNERLHTGVGSIYAIG
DIVPGVQLAHRGYQQGRFVAEEIAGLNPVVVPDINVPKVTFTEPEIASVGYSQPKAEEKF
GKDNVETFEYNLAGNGKSSILGTGGFIKLVREKDGPIVGFHAIGTRISEQIGEGQLMVNW
EAYPEDVAAFVHAHPTQNEAIGEAAMALAGVPLHG
NT seq 1368 nt   +upstreamnt  +downstreamnt
gtggccgacaaccaatacgacatcctggtcctgggcggaggatccgccgggtactccgcc
gcactgcgcgcggtccagctgggctacagcgtggctctgatcgagaaggagaagctcggc
ggcacgtgcctgcactggggctgcatccccacgaaggcgtacctgcactcggcggagctg
gccgagggcgcccgggagtccgagaagtacggcatcaaggccaccctcgagtccatcgac
atgggtgcggtgcgcgactacaagaacaagatcgtgcagggcaagtacaagggcctgacc
gggctcatgaagatgcgcaaggtggacgtcgtcgccggcaacggcaagctcaccgggccc
aacaccatcgacgtggacggcaccacctacaccggcaagcacatcatcctggccaccggc
tcggtctccaagaccctcggcatcgagatcggcggccgcgtgatgacctccaccgaggcg
ctggagatcgacttcgtccccaagtccgcgatcgtgcttggcggcggtgtcatcggctgc
gagttcgcgtccatgtggcgctccttcggcgtggacgtcaccgtgatcgagggcctgccc
cacctcgtcgccaacgaggacccggccatcatcaagacgctcgagcgcgagttcaagaag
cgcggcatcaagtacaacctgggcacgttcttcgagaaggtcgagcagaacgacgacggc
gccaaggtcaccctcgcggacggcaaggagttcgaggccgacgtcgtgctcgtggccgtg
ggccgcggccccaacaccgcggacatgggcttcgaggagcagggcatccccatggaccgc
ggcttcgtgaccccgaacgagcggctgcacaccggcgtgggcagcatctacgcgatcggc
gacatcgtcccgggcgtgcagctggctcaccgcggctaccagcagggccgcttcgtggcc
gaggagatcgccgggctgaaccccgtggtcgtcccggacatcaacgtccccaaggtcacc
ttcaccgagccggagatcgcgtccgtgggctactcgcagcccaaggccgaggagaagttc
ggcaaggacaacgtggagaccttcgagtacaacctggccggcaacggcaagagctcgatc
ctcggcaccggcggcttcatcaagctggtgcgcgagaaggacggccccatcgtcggcttc
cacgcgatcggcacccgcatcagcgagcagatcggcgagggccagctcatggtgaactgg
gaggcctacccggaggacgtggcggcgttcgtccacgcccaccccacgcagaacgaggcc
atcggcgaggcggccatggcgctggccggtgtcccgctgcacggctga

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