Kocuria varians: CIB50_0001743
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Entry
CIB50_0001743 CDS
T06882
Symbol
pafA
Name
(GenBank) Pup--protein ligase
KO
K13571
proteasome accessory factor A [EC:
6.3.1.19
]
Organism
kvr
Kocuria varians
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
kvr03051
]
CIB50_0001743 (pafA)
Enzymes [BR:
kvr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.1 Acid-D-ammonia (or amine) ligases (amide synthases)
6.3.1.19 prokaryotic ubiquitin-like protein ligase
CIB50_0001743 (pafA)
Proteasome [BR:
kvr03051
]
Prokaryotic proteasome
Bacterial regulatory particles
CIB50_0001743 (pafA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pup_ligase
HTH_3
Motif
Other DBs
NCBI-ProteinID:
QMS57018
UniProt:
A0A7D7Q475
LinkDB
All DBs
Position
1969922..1971331
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AA seq
469 aa
AA seq
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MERRIYGIETEFGLTHSAPQGRPLGADETARRMFAPVLARCRASNVFLPNGGRLYLDVGS
HPEYATAEAATLHDVVAQDAAGERIVDDLRAQLQESLDAEGVGGTVHLFKNNADSAGNSF
GSHENYMIARRTEFSRLVQHLLPLLVTRQILVGAGRVHPDGPPPFGSLALGDGRPGYSFS
QRADHVWEGSSSATTRSRPMINTRDEPHADAERYRRLHVITGDSSMSQTTTALKIGISDA
VLRMIEAGQILPDRTLADPAAALRQVSHDLTGTAPLELAAGGHRSAIELQREYLEEVTRF
VQRRGAHHDRLDWVLELWDRGLRAVEEQDSSLVDRELDWAIKKKLLDSYASAHGMDWSHP
RMAQLDLAYHDTSARHGLFHMLERRGAVETFVAPQDVERAVVEGPPTRARMRGRFVAAAH
DAGVNTTVDWVHLKLNGEHQQSTVMCKDPFATTQPDVEELIAEITAGRA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
gtggaacggcgcatctacgggatcgagaccgagttcggactgacccacagcgcaccgcag
ggccggcccctcggtgcggacgagacggcgcggcggatgttcgcgccggtgctcgcgcgg
tgcagggcctccaatgtgttcctgcccaacggcgggcgcctgtacctggacgtgggctcc
caccccgagtacgcgacggcggaggccgcgaccctgcacgacgtcgtcgcccaggacgcg
gccggcgaacggatcgtggacgacctgcgcgcgcagctgcaggagagcctggacgccgag
ggcgtgggcggcacggtgcacctgttcaagaacaacgcggactccgccggcaactcgttc
ggctcgcacgagaactacatgatcgcccgccgcacggagttctcccggctggtccagcac
ctgctgccgctgctggtcacgcgccagatcctcgtgggcgcgggccgggtccacccggac
ggcccgccgcccttcggctccctggccctgggggacgggcgccccggctactcgttctcg
cagcgggcggaccacgtgtgggagggctcgtcctcggccaccacccgttcgcggcccatg
atcaacaccagggacgagccccacgcggacgccgagcgctaccgccggctgcacgtcatc
accggggactcgtccatgtcccagaccaccacggcgctgaagatcggcatctcggacgcg
gtgctgcgcatgatcgaggcgggacagatcctgccggaccgcacgctcgcggacccggcc
gcagccctgcggcaggtctcccacgacctcaccggcacggcaccgctggagctggccgcg
ggaggccaccgctcggcgatcgagctgcagcgggagtacctggaggaggtcacccggttc
gtgcagcgccgcggcgcgcaccacgaccgcctcgactgggttctcgagctgtgggaccgc
gggctgcgcgccgtcgaggagcaggacagctcgctggtggaccgcgaactggactgggcc
atcaagaagaagctgctggactcctacgcgagcgcccacgggatggactggtcccacccc
cgcatggcgcagctggacctcgcctaccacgacacctccgcccgccacgggctcttccac
atgctggagcgccgcggcgccgtggagacgttcgtggccccgcaggacgtcgagcgcgcc
gtcgtcgaaggccctcccacccgggcccggatgcgcgggcggttcgtggccgcggcccac
gacgccggggtcaacaccaccgtggactgggtgcacctgaagctcaacggggagcaccag
cagagcacggtcatgtgcaaggacccgttcgccaccacccagccggacgtcgaggagctg
atcgcggagatcaccgccggacgcgcctga
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