Kocuria varians: CIB50_0001801
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Entry
CIB50_0001801 CDS
T06882
Symbol
rpoZ
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
kvr
Kocuria varians
Pathway
kvr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CIB50_0001801 (rpoZ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kvr03021
]
CIB50_0001801 (rpoZ)
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001801 (rpoZ)
Enzymes [BR:
kvr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CIB50_0001801 (rpoZ)
Transcription machinery [BR:
kvr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CIB50_0001801 (rpoZ)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CIB50_0001801 (rpoZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
QMS57076
UniProt:
A0A7D7PZI4
LinkDB
All DBs
Position
2036827..2037294
Genome browser
AA seq
155 aa
AA seq
DB search
MNNEGIVDPPVDRLLDKTDSKYGLVIFAARRARQINAYYSQLHEGLFEYVGPLVDTQLNE
KPLSIAFREIDEGLIEADHVTNGGFTPNGQLVSDEPTATEMFTGDFFAQGEDAGSAAVFS
DGVQVAEEQHPEGTETVTETVAEEATEDSTEPTEQ
NT seq
468 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaaggcatcgtcgacccgcccgtggaccggctgctcgacaagacggattcc
aagtacggcctggtgatcttcgctgcgcgtcgcgcccgccagatcaacgcgtactactcg
cagctgcacgagggcctgttcgagtacgtgggcccgctcgtggacacccagctcaacgag
aagcccctgtccatcgccttccgcgagatcgacgagggcctgatcgaggccgaccacgtg
accaacggaggcttcacccccaacggccagctggtctcggacgagcccacggccaccgag
atgttcaccggggacttcttcgcccagggtgaggatgccggcagcgcggcggtcttctcg
gacggcgtgcaggttgccgaggagcagcaccccgagggcaccgagaccgtcacggagacc
gtggccgaggaggccaccgaggactccacggagcccaccgagcagtga
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