Kocuria varians: CIB50_0001804
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Entry
CIB50_0001804 CDS
T06882
Symbol
priA
Name
(GenBank) putative primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
kvr
Kocuria varians
Pathway
kvr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CIB50_0001804 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001804 (priA)
Enzymes [BR:
kvr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CIB50_0001804 (priA)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CIB50_0001804 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
C1_1
Motif
Other DBs
NCBI-ProteinID:
QMS57079
UniProt:
A0A7D7Q111
LinkDB
All DBs
Position
2039923..2042340
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AA seq
805 aa
AA seq
DB search
MTPEPEQGSGPTESAPAAAAGANEPGEQLTLAGLPRAVARPAKAPAAGTGRDAAAAPVRR
AVGSEGTAPENPVAQVLLEAYVPHLDRLFDYRVTAALDTQAVVGSKVSVLFSGRKMSGWI
VHRVAHTDVPEDRLLPVRRVLSPLPVARPEIVELAQAVADRCAGTAADVLRVAIAPRVAR
VDKEFSSAEQSEDGEVTSSTTGQAPGDPSHEAASSAAPTDAAAPPRADPLPVEASSGDPL
RADSLPAHEAPAHTSPAHAPSPALWDHYKGGPEYIAAVAAGEPARAVVEVLPAAPDHDWA
LLTAHAMATAYAAGRGAVGVVADHKGLDRLEKALHELVGEDAVVRLHAGDGPTPRYRGFL
ELALGRKKLAVGTRSAAYAPVQDLALVCCHDDGDVNFVEQRAPYQHTRDVLLLRAQREGL
ASLFTGHAVSPEAQRLVTTGWAARVAPPRSVLRRFSPRIEATSDSFNSERDPLAARARLP
QEAFRVARAGLERGPVLVQVARKGYAPVLACQRCRTPARCRACNGPLALSSAQAVPVCSW
CGRQAHDWRCAECGFARVRLSSVGAGRTAEELGRAFPQVPVISSSERTVRARVGSAPALV
VATPGAEPVAEGGYAAALLLDGNQMLARPWLRAEEQTLRRWFNAAALVRSSSDGGTVVVT
ADQDRAVSALVRWDPAGHSARELQERHELGLPPAVRTAALTGPRDAVEATLRDLALPERV
RVVGPAPVEQTPGNGADLAEPATQDAVDVAGSPERGGNRLYCALLFFGFGIAPRVTGALR
AEKARASALREHAPVTVRCDVADLL
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
gtgaccccggagcccgagcaggggtccggtccgaccgagtccgcaccagcggctgctgcc
ggggccaacgagccgggagagcagctgaccctcgcgggacttccgcgggccgtggcgagg
ccggcgaaggcccctgctgcgggcaccgggcgcgacgctgctgcggcacctgtccgccgt
gcggtgggctccgagggcacagcccccgagaaccccgtggcgcaggtgctgctggaggcc
tacgtgccccacctggaccggctcttcgactaccgcgtcaccgccgcgctggacacgcag
gccgtggtgggctccaaggtgtccgtgctgttctcgggccgcaagatgtccgggtggatc
gtgcaccgggtggcgcacacggacgtccccgaggaccgtctgctgcccgtgcgtcgggtg
ctcagccccctgcccgttgcacggcccgagatcgtggagctcgcacaggccgtggcggac
cgctgtgcgggaactgccgcggacgtgctgcgggtggccatcgccccgcgggtcgcacgg
gtggacaaggagttctcctcggcggaacagtccgaggacggcgaggtcacgtcctcaacc
accggtcaagcaccgggagacccttcccacgaggctgcctcatcggcggcccccaccgat
gccgccgcccctccgcgggcagacccgttgcctgtcgaagcgtcatctggtgacccgctg
cgggcagactcgcttcccgcccacgaggcgcctgcgcacacctcacccgcccacgcgccg
tcgccagccctctgggatcactacaagggcggccccgagtacatcgccgcggtggcggcg
ggcgagcccgcgcgcgccgtcgtcgaggtgctgcccgccgcccccgaccacgactgggcg
ctcctcacggcccacgccatggccacggcctacgccgctggccggggcgcggtgggtgtg
gtcgcggaccacaagggcctcgaccgcctcgagaaggcgctccacgagctggtgggggag
gacgccgtcgtccggctgcacgccggtgacggcccgaccccgcgctaccgaggcttcctc
gagctcgccctgggccgcaagaagctggccgtggggacccgttcggcggcctacgccccg
gtgcaggacctcgctctcgtgtgctgccacgacgacggggacgtcaacttcgtggagcag
cgcgcgccctaccagcacacgcgcgacgtgctcctgctgcgggcgcagcgcgaggggctc
gcgagtctgttcaccggccacgctgtgagcccggaggcgcagcggctcgtgaccacgggc
tgggcggcgcgggtggctccgccccggtccgtgctgcggcggttctccccgcggatcgag
gcgacgtcggactccttcaacagtgagcgggacccgcttgcggcgcgggcccggctgccg
caggaggcgttccgggtggcgcgcgcggggctggagcgcggcccggtgctcgtgcaggtg
gcccgcaagggctacgcaccggtgctcgcgtgccagcgctgccgcactcccgcgcgctgc
cgcgcgtgcaacgggcccctggcgctgagctccgcgcaggcggtgcccgtgtgcagctgg
tgcggtcgccaggcccacgactggcggtgcgcggagtgcgggttcgcgcgggtgcgtctg
agttcggtgggcgcggggcgcactgccgaggagctgggccgcgccttcccccaggtgccg
gtgatctcctcgagcgagcgcacggtgcgtgcgcgagtggggtctgcacctgcactcgtg
gtggccacgccgggtgccgaacccgtggccgagggcggctacgcggcagccctgctgctg
gacggcaaccagatgctcgcgcgaccctggctccgcgcggaggagcagaccctgcgccgg
tggttcaacgcggccgccctggtgcggtcgtcctccgacgggggcaccgtggtggtcacg
gccgaccaggaccgtgccgtctcggcgctcgtgcgctgggatccggcagggcactccgcg
cgagagctgcaggagcgtcatgagctgggtctgccgccagcggtacggaccgcggcgctg
accggcccgcgcgacgccgtggaggccactctgcgtgacctcgcactgcccgagcgtgtt
cgcgtggtcgggccagcgccggtggagcaaacacccggaaacggtgcggacctggccgag
cccgccactcaggatgccgtcgacgtcgccggctccccggagcgcggcgggaaccggctc
tactgtgcgcttctgttctttgggttcgggatcgcgccgcgggtcaccggtgccctgcgg
gcggagaaggcacgcgcctccgcgctgcgcgaacacgcgccggtcacggtgcgctgcgac
gtcgccgacctgctgtag
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