Kocuria varians: CIB50_0001925
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Entry
CIB50_0001925 CDS
T06882
Symbol
uvrA_2
Name
(GenBank) UvrABC system protein A
KO
K03701
excinuclease ABC subunit A
Organism
kvr
Kocuria varians
Pathway
kvr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CIB50_0001925 (uvrA_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kvr03400
]
CIB50_0001925 (uvrA_2)
DNA repair and recombination proteins [BR:
kvr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CIB50_0001925 (uvrA_2)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CIB50_0001925 (uvrA_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_21
AAA_16
APS_kinase
AAA_25
AAA_22
DnaJ_CXXCXGXG
NACHT
ATPase
BCA_ABC_TP_C
ScfRs
Viral_helicase1
cobW
Septin
DUF2116
Motif
Other DBs
NCBI-ProteinID:
QMS57199
UniProt:
A0A7D7Q144
LinkDB
All DBs
Position
complement(2183071..2186103)
Genome browser
AA seq
1010 aa
AA seq
DB search
MSERTPSSDAQSTSVLAERAAHEHAPKTRASGVSDLTEIVVQGAREHNLKNVDLTIPRDS
MVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSSYARMFLGRVDKPDVDFIEGLSPAVSI
DQKSTSRNPRSTVGTITEIYDYMRLLWARIGHPHCPVCGEPITKQTPQQIVDQLLELPER
TRFMVLAPVVKGRKGEFQDLFQQLSQQGYARAVVDGETVQLEDAPKLKKQYKHTIDVVVD
RLTAKPDARQRLTDSVETALNLASGRVVVELVTREGEESPWADARRTFSEHLACPNEHPL
QTDEIEPRSFSFNAPFGACPECDGIGSRLEVDEDLVVPNPDLSLVEGAIAPWSLGKATSD
YWNRLLAGLGEEVGFDLVTPWKDLPTKARKAILHGKDYKVTVAYKNRWGRERRYTQGFEG
VFGYIKRKHEETESDHAKDRYEQYMRQVACPECGGARLNPTILGVTVGGKNIAEATRLPM
RDSLTFFEQLELDSREAKIGDQVLKEIVARLTFLIDVGLDYLNLERAAATLSGGEAQRIR
LATQIGAGLVGVLYVLDEPSIGLHQRDNRRLIDTLLRLRDMGNTLIVVEHDEDTMREADW
VVDVGPGAGVHGGDVVHSGTYDELLHNRESITADYLTGRRLIEVPRKRRPVDPKRKLTVV
GARENNLQNLTVDFPLGVFVAVTGVSGSGKSTLVNDILYTSLANQLNGAKQVPGRHRRID
GLEHLDKVVHVDQSPIGRTPRSNPATYTGVFDRIRKLFAETQEAKVRGYQQGRFSFNVKG
GRCEACSGDGTLKIEMNFLPDVYVPCEVCKGARYNRETLEVHYKGKNIAEVLDMPIEEAA
EFFAPFTAIARYLNTLVEVGLGYVRLGQPATTLSGGEAQRVKLAAELQKRSNGRTIYVLD
EPTTGLHFEDIRKLLMVLQSLVDKGNSVMTIEHNLDVVKSADWIVDLGPNGGSGGGTVVA
EGTPEQVARNEDSYTGQFLREVLESSAAREAAHEAGEPATREMATSGERA
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
gtgtcagagcgaaccccttcatccgatgcccagtccacgtccgtgctcgccgagcgcgcg
gcacacgagcacgcaccgaagacccgtgcctccggggtctcggacctcacggagatcgtg
gtgcagggggcgcgcgagcacaacctgaagaacgtggacctcaccatcccgcgggactcc
atggtcgtgttcaccggcctgtccgggtccgggaagtcctcgctcgccttcgacaccatc
ttcgcggagggccagcggcgctacgtcgagtccctgtcctcctacgcgcgcatgttcctc
gggcgggtggacaagccggacgtggacttcatcgaggggctctccccggcggtgtccatc
gaccagaagtcgacctcccgcaacccgcgctccacggtgggcaccatcaccgagatctac
gactacatgcgtctgctgtgggcgcgcatcggccacccgcactgccccgtgtgcggggag
cccatcaccaagcagaccccgcagcagatcgtggaccagctgctcgagctgcccgaacgc
acccgcttcatggtgctggcccccgtggtcaagggccgcaagggcgagttccaggacctg
ttccagcagctgagccagcagggctacgcgcgcgccgtcgtggacggcgagaccgtccag
ctggaggacgcgcccaagctgaagaagcagtacaagcacaccatcgacgtcgtggtggac
cgtctgacggccaagccggacgcccggcagcggctcacggactccgtggagaccgccctg
aacctggcctccgggcgcgtggtcgtggagctcgtgacccgtgagggggaggagtccccg
tgggcggatgcccggcgcacgttctccgagcacctcgcgtgccccaacgagcacccgctg
cagacggacgagatcgaaccccgctccttctccttcaacgcgcccttcggcgcgtgcccc
gagtgcgacggcatcggctcgcggctcgaggtggacgaggacctcgtggtcccgaacccg
gacctctccctcgtggagggtgccattgcgccgtggtccctcggcaaggccacgagcgac
tactggaaccggctgctcgccgggctcggcgaggaggtcggcttcgacctcgtcacgccg
tggaaggaccttccgaccaaggcgcgcaaggcgatcctgcacggcaaggactacaaggtc
accgtggcctacaagaacaggtggggccgcgagcggcgctacacccagggcttcgagggg
gtcttcggctacatcaagcgcaagcacgaggagaccgagtcggaccacgccaaggaccgc
tacgagcagtacatgcggcaggtggcctgccccgagtgcgggggagcgcggctgaacccc
acgatcctcggcgtgaccgtgggcgggaagaacatcgcggaggccacccggctgcccatg
cgggactccctgaccttcttcgagcagctggagctggacagccgcgaggcgaagatcggc
gaccaggtgctcaaggagatcgtggcgcgcctgacgttcctgatcgacgtcgggctggac
tacctcaacctggagcgcgccgcagccaccctctccggcggcgaggcccagcggatccgg
ctggccacgcagatcggcgccgggctcgtgggcgtgctctacgtcctggacgagccgtcc
atcggcctgcaccagcgggacaaccgacgcctgatcgacaccctgctgcggctgcgggac
atgggcaacacgctcatcgtggtggagcacgacgaggacaccatgcgcgaggccgactgg
gtcgtggacgtgggacccggcgccggagtgcacggcggtgacgtggtgcactcgggcacc
tacgacgagctgctgcacaaccgggagtccatcaccgcggactacctcaccgggcgcagg
ctcatcgaggtgccacggaagcgccgcccggtcgaccccaagcgcaagctgacggtggtc
ggggcgcgcgagaacaacctgcagaacctcacggtggacttccccctgggggtcttcgtg
gccgtcacgggcgtctccggctccgggaagtccaccctggtcaacgacatcctctacacg
agcctggccaaccagctcaacggcgccaagcaggtgccgggtcgccaccggcgcatcgac
gggctggagcacctggacaaggtggtgcacgtggaccagagccccatcgggcgcaccccg
cgctccaaccccgccacgtacacgggggtcttcgacaggatccgcaagctcttcgcggag
acccaggaggccaaggtccgcggctaccagcagggccggttctcgttcaacgtcaagggc
gggcgctgcgaggcgtgctccggtgacggcacgctgaagatcgagatgaacttcctgccg
gacgtctacgttccgtgcgaggtgtgcaagggggcccgctacaaccgcgagaccctcgag
gtgcactacaagggcaagaacatcgccgaggtcctggacatgcccatcgaggaggcggcc
gagttcttcgccccgttcaccgcgatcgcgcgctacctcaacaccctcgtggaggtgggc
ctgggctacgtgcgcctgggccagccggccaccaccctctccggtggcgaggcccagcgc
gtgaagctcgccgcggagctgcagaagcgctccaacgggcgcaccatctacgtcctggac
gagcccaccacgggtctgcacttcgaggacatccgcaagctgctgatggtgctgcagagc
ctcgtggacaagggcaacagcgtcatgaccatcgagcacaacctggacgtcgtgaagtcc
gcggactggatcgtggacctcggccccaacggcggctcgggcggtggcacggtcgtggcc
gaggggaccccggagcaggtggcccgcaacgaggacagctacacgggccagttcctgcgc
gaggtgctcgagagctccgccgcgagggaagccgcccacgaggcgggcgagccggccacg
cgggagatggcgacgtcgggggagcgggcgtga
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