Kocuria varians: CIB50_0001942
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Entry
CIB50_0001942 CDS
T06882
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
kvr
Kocuria varians
Pathway
kvr03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
CIB50_0001942 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
kvr03011
]
CIB50_0001942 (rpsA)
Ribosome [BR:
kvr03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
CIB50_0001942 (rpsA)
Bacteria
CIB50_0001942 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
DUF4407
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QMS57216
UniProt:
A0A7D7PZM5
LinkDB
All DBs
Position
complement(2204855..2206351)
Genome browser
AA seq
498 aa
AA seq
DB search
MTTTTQQVAVNDIGTEEDFLAAVDATIKYFNDGDLVEGTVVKVDRDEVLLDIGYKTEGVI
PSRELSIKHDINPDDVVAVGDEVEALVLTKEDKEGRLILSKKRAQYERAWGDIEKVKEDD
GVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQLEAKIIELDKNRNNV
VLSRRAWLEQTQSEVRANFLQQLQKGQVRTGTVSSIVNFGAFVDLGGVDGLVHVSELSWK
HIDHPSEVVEVGQEVTVEVLDVDMDRERVSLSLKATQEDPWQLFARTHALGQVVPGKVTK
LVPFGAFVRVEDGIEGLVHISELAQRHVDMAEQVVSVNEELFVKVIDIDLDRRRISLSLK
QANEGVDPESTEFDPAQYGMAAEYDEQGNYKYPEGFDPETNEWIEGYEDQRAAWEEQYAQ
AQSRWEAHKEQVRKHIQDDLEAATTTSSSSSSSSSSSSPAPSRASGPTSYSSEQSAEDSG
TLASDEALAALREKLTGH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaccacccagcaggttgccgtcaacgacatcggaacggaagaggacttcctc
gccgctgtcgacgcgaccatcaagtacttcaacgacggcgacctcgtggaaggcaccgtc
gtcaaggtcgaccgcgacgaggtcctcctggacatcgggtacaagaccgaaggtgtcatc
ccctcgcgtgagctgtccatcaagcacgacatcaaccccgacgatgtcgtggccgtgggt
gacgaggtggaggctctggtcctcaccaaggaggacaaggaaggccgcctgatcctctcc
aagaagcgcgctcagtacgagcgcgcctggggcgacatcgagaaggtcaaggaggacgac
ggcgtcgtcaccggcaccgtcatcgaggtcgtcaagggcggcctcatcctggacatcggc
ctgcgcggcttcctgcccgcctccctcgtggagatgcgccgcgtccgcgacctcgcgccg
tacatcggtcagcagctcgaggcgaagatcatcgagctggacaagaaccgcaacaacgtg
gtcctctcccgccgtgcctggctcgagcagacccagtccgaggtgcgcgccaacttcctg
cagcagctgcagaagggccaggtccgcacgggcaccgtctcctcgatcgtcaacttcggt
gcgttcgtggacctgggcggcgtcgacggcctggtgcacgtctccgagctgtcctggaag
cacatcgaccacccctccgaggttgtcgaggtcggtcaggaagtcaccgtcgaggtgctg
gacgtggacatggaccgcgagcgcgtctccctgtccctgaaggccacccaggaggatccc
tggcagctcttcgcccgcacccacgccctgggccaggtcgtgccgggcaaggtcaccaag
ctggttcccttcggtgcgttcgtgcgcgtcgaggacggcatcgagggcctggtgcacatc
tccgagctggcgcagcgtcacgtggacatggccgagcaggtcgtctccgtgaacgaggag
ctcttcgtcaaggtcatcgacatcgacctggaccgtcgccgcatctcgctgtccctcaag
caggccaacgagggcgtggaccccgagtccaccgagttcgacccggcccagtacggcatg
gccgccgagtacgacgagcagggcaactacaagtaccccgagggcttcgatcccgagacc
aacgagtggatcgagggctacgaggaccagcgcgcggcgtgggaggagcagtacgctcag
gcccagtcccgctgggaggcccacaaggagcaggtgcgcaagcacatccaggacgatctg
gaagccgcgacgaccacgtcgtcctcctcttcctcgtcgtcttcgtcctcctcgccggct
ccgagccgcgcgtccggtcccacgagctactcctccgagcagtcggccgaggactccggc
acgctggcctcggacgaggctctggccgcgctgcgcgagaagctcaccggtcactga
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